PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G008898_P01
Common NamebHLH73, LOC103648225, Zm.86460
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bHLH
Protein Properties Length: 251aa    MW: 27302.4 Da    PI: 9.7597
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G008898_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.32.1e-11133180455
                        HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +h+ +Er RR++i +++  L++++P +    +k   Ka++L + ++YI+sLq
  GRMZM2G008898_P01 133 SHSLAERARREKISERMKVLQDIVPGC----NKVIGKASVLDEIINYIQSLQ 180
                        8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.30E-10127184No hitNo description
SuperFamilySSF474594.97E-18127196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.9E-19129198IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.12129179IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.8E-9133180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.7E-11135185IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
MDPASSVAAE FWRPPYHHLR ASSVVTAAAR SGGGSSSRRR PRRDAAASSE EEPSKLVSTS  60
GTAASSSAGC QDSADPEAKR LKQIAPSEKN DRRTEAETNS GNASKSADKK PAPKEPPKDY  120
IHVRARRGQA TDSHSLAERA RREKISERMK VLQDIVPGCN KVIGKASVLD EIINYIQSLQ  180
RQVEFLSMKL EAINAHVSNA TVAFPTKDFG VAPYNTAPSL TLDPQTPREY AQGSMSDWLH  240
MQVGNAYERV T
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.864600.0meristem| sheath| shoot
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G008898
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G008898_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7277450.0KJ727745.1 Zea mays clone pUT5686 bHLH transcription factor (bHLH73) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008670933.10.0transcription factor BHLH094
SwissprotQ69WS31e-115BH094_ORYSJ; Transcription factor BHLH094
TrEMBLA0A060CXJ60.0A0A060CXJ6_MAIZE; BHLH transcription factor (Fragment)
STRINGGRMZM2G008898_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP30653577
Representative plantOGRP5816313
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.19e-62BIG PETAL P