PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G021369_P02
Common NameLOC100216705
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family ERF
Protein Properties Length: 195aa    MW: 20486.3 Da    PI: 12.2751
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G021369_P02genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.23.6e-173180255
                AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       +ykGVr ++ +g+Wv+e+r ps+   ++r++lg++ tae Aa+a++aa ++l+g
  GRMZM2G021369_P02 31 QYKGVRMRS-WGSWVSEVRAPSQ---KTRIWLGSYSTAEAAARAYDAALLCLKG 80
                       6*****998.*******999854...6************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.103.9E-283089IPR001471AP2/ERF domain
SMARTSM003805.9E-313195IPR001471AP2/ERF domain
PROSITE profilePS5103221.6543189IPR001471AP2/ERF domain
SuperFamilySSF541711.7E-173190IPR016177DNA-binding domain
CDDcd000183.61E-143191No hitNo description
PfamPF008471.2E-103180IPR001471AP2/ERF domain
PRINTSPR003674.2E-93243IPR001471AP2/ERF domain
PRINTSPR003674.2E-95470IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MVKGAHFQDA AVDGGAGGNA EAAMQGGAKR QYKGVRMRSW GSWVSEVRAP SQKTRIWLGS  60
YSTAEAAARA YDAALLCLKG SAAADLNFPV HLPFHVPAAA AMSPKSIQRV AAAAAAASGG  120
ATCSPPAPLL RAATATRRRR LALAPRRPAG TLACATARRT TTTWTWTWRA TPTRTSPRSR  180
TSRPSSSRLS AWSTP
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.322140.0cell lignification| glume
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G021369
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G021369_P02
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0372120.0BT037212.1 Zea mays full-length cDNA clone ZM_BFb0159C05 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020393375.14e-84ethylene-responsive transcription factor ERF013
TrEMBLB4FJC41e-132B4FJC4_MAIZE; Uncharacterized protein
STRINGGRMZM2G021369_P011e-83(Zea mays)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G44830.11e-28ERF family protein