PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G034421_P01
Common NameLOC103635796, ZEAMMB73_148386
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family WRKY
Protein Properties Length: 228aa    MW: 25360.5 Da    PI: 7.6631
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G034421_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY57.62.5e-18134195259
                        --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSS.TTEEEEEEES--SS- CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaed.pkvveitYegeHnhe 59 
                        +D ++WrKYG K++  se+pr YY+C ++   +Cp+kk v+++++  p ++ +t  +eH+++
  GRMZM2G034421_P01 134 NDRFHWRKYGEKNILYSEYPRLYYKCGYSddhKCPAKKYVQQQSNSyPPIFLVTLINEHTCD 195
                        79*************************998899*******987654389**********996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.6E-19125195IPR003657WRKY domain
SuperFamilySSF1182906.67E-19128195IPR003657WRKY domain
PROSITE profilePS5081114.653128197IPR003657WRKY domain
SMARTSM007743.5E-26133196IPR003657WRKY domain
PfamPF031061.4E-19134195IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    Send to blast
MPLSPPPPSS SPRQAAIQEL RRGTQLAELL RQQVELIPEP NRRHAAAVNV GEISMAMESS  60
LSILQSQMEH PFSEPEVMAA ALTAHSDGGT SGERNGGPVA RTRKVRVRHR PGRGRPAAGD  120
ELPIKEILTE APENDRFHWR KYGEKNILYS EYPRLYYKCG YSDDHKCPAK KYVQQQSNSY  180
PPIFLVTLIN EHTCDALFRD DEPIISSSSS GSSQVLDFTK ASLSSPLH
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G034421
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G034421_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008656396.11e-169probable WRKY transcription factor 62
TrEMBLK7V4I11e-168K7V4I1_MAIZE; Putative WRKY DNA-binding domain superfamily protein
STRINGGRMZM2G034421_P011e-169(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP99932944
Representative plantOGRP1427144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66600.15e-15ABA overly sensitive mutant 3