PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G035370_P01
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family G2-like
Protein Properties Length: 467aa    MW: 51625.6 Da    PI: 8.0794
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G035370_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.62.4e-32287341155
            G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                        k+r+rWt++LHerFv+ v+qLGG++kAtPk il+lm+ +gLt++h+kSHLQkYR+
  GRMZM2G035370_P01 287 KTRIRWTQDLHERFVDSVNQLGGADKATPKGILKLMNSDGLTIYHIKSHLQKYRI 341
                        68****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.649284344IPR017930Myb domain
SuperFamilySSF466892.87E-17285341IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.608.3E-30286342IPR009057Homeodomain-like
TIGRFAMsTIGR015574.7E-24287342IPR006447Myb domain, plants
PfamPF002499.8E-8291340IPR001005SANT/Myb domain
PfamPF143793.2E-21378424IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0006505anatomycentral spike of ear inflorescence
PO:0020142anatomystem internode
PO:0001083developmental stageinflorescence development stage
PO:0007006developmental stageIL.00 inflorescence just visible stage
PO:0007016developmental stagewhole plant flowering stage
PO:0007072developmental stageLP.18 eighteen leaves visible stage
PO:0007116developmental stageLP.11 eleven leaves visible stage
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    Send to blast
MLLIKLVYLL LRLISWFAVP VCFPARLFSP DTWSGDRWMM DAKKIKLHDY HLYGSQQLFP  60
AAGGLSFHPA AGLMSSLPQP PHAAWLHEDH HTTTPRSVLA THGSLQGSRC VGSDAAAFFA  120
AEELMMGMPR FDDCPLGGTE MTAFAKRPTT EDEQLHYRRP GPVDPLPLRD SAAVRTYYVR  180
PQQRDGATEA PPSLELPFQQ GRRQQQQLFG NASTGRLLGG EPKAHSFTAH VATSTLLPAM  240
EAPAGMQQSP TENPLSRSCS TIGAPATHVG SGNVAAAAAP GHGAPSKTRI RWTQDLHERF  300
VDSVNQLGGA DKATPKGILK LMNSDGLTIY HIKSHLQKYR IAKYMPASST SEGNLIYRKQ  360
EKRAVGNDVQ NLDPSTGMKI TEALRVQLDV QRRLHEQLEI QRNLQLRIEV QGKKLQKMFE  420
EQMKASRTVM EPRQEEEDDD DDAFNDVHVQ LLAAAARSDA GFQLNIS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A3e-22287344259Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B3e-22287344259Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A3e-22287344158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B3e-22287344158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C3e-22287344158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D3e-22287344158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A3e-22287344259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C3e-22287344259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D3e-22287344259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F3e-22287344259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H3e-22287344259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J3e-22287344259Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.210130.0endosperm
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G035370
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G035370_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0685131e-122BT068513.1 Zea mays full-length cDNA clone ZM_BFb0272J03 mRNA, complete cds.
GenBankEU9574861e-122EU957486.1 Zea mays clone 1594418 transfactor mRNA, complete cds.
GenBankKJ7268311e-122KJ726831.1 Zea mays clone pUT3371 G2-like transcription factor (GLK52) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020403665.10.0uncharacterized protein LOC103645799 isoform X2
TrEMBLA0A1D6DUN20.0A0A1D6DUN2_MAIZE; Myb family transcription factor PHL5
STRINGGRMZM2G035370_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP69333751
Representative plantOGRP7817262
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.11e-59G2-like family protein