PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G044077_P01
Common NameEREB96, ZEAMMB73_650671
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family ERF
Protein Properties Length: 325aa    MW: 35763.7 Da    PI: 4.4318
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G044077_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83.2e-19116166155
                AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                        ++++GVr+++ +g+++AeIrd +     r  r++lg+f+taeeAak ++ a+ +l+g
  GRMZM2G044077_P01 116 PRFRGVRRRP-WGKYAAEIRDpW-----RrVRVWLGTFDTAEEAAKVYDSAAVQLRG 166
                        689*******.**********88.....55************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.7E-11116166IPR001471AP2/ERF domain
CDDcd000189.15E-29116176No hitNo description
PROSITE profilePS5103223.341117174IPR001471AP2/ERF domain
SMARTSM003805.1E-35117180IPR001471AP2/ERF domain
SuperFamilySSF541716.47E-21117175IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.108.0E-29117175IPR001471AP2/ERF domain
PRINTSPR003673.9E-10118129IPR001471AP2/ERF domain
PRINTSPR003673.9E-10140156IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MWPMEEEEVF VTVRRTEHVD VTSRAVVVAA GRAAVAGPRT VRVFCDDYDA TDSSGDEAEE  60
EEEKKAARRR VKRYVQEIHL ERAAKEEEEA TAAASLGAVL PGPKRKRKPD GEASEPRFRG  120
VRRRPWGKYA AEIRDPWRRV RVWLGTFDTA EEAAKVYDSA AVQLRGRDAT TNFQQQVDPE  180
RLSQPAASKS AATSTYDSGE ESVTAVASPT SVLRSFPPSA DAGGTRSKAA ARNPETGDST  240
IVFGCPFSLA SELPALYTEF DLLADLPLDF LADAPEVEAL SLPPFSACTP EEEEECPSDA  300
VRWRQVDELF QDITDLFQID PLPVA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-191131781076Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1102108PKRKRKP
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.59563e-77ear| meristem| ovary| tassel
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G044077
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G044077_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7275160.0KJ727516.1 Zea mays clone pUT5375 AP2-EREBP transcription factor (EREB96) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008655790.10.0pathogenesis-related genes transcriptional activator PTI6
TrEMBLA0A3L6DPS70.0A0A3L6DPS7_MAIZE; Ethylene-responsive transcription factor CRF4
TrEMBLK7URF40.0K7URF4_MAIZE; AP2-EREBP transcription factor
STRINGGRMZM2G044077_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP16903697
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.11e-26cytokinin response factor 4