PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G047918_P01
Common NameEREB191
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family ERF
Protein Properties Length: 242aa    MW: 26053.3 Da    PI: 5.9636
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G047918_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.24.2e-184895152
                AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52
                       + y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++aa++ 
  GRMZM2G047918_P01 48 PSYRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDAAALV 95
                       57*****998.**********843...6*********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.82E-1948107No hitNo description
PfamPF008471.2E-124895IPR001471AP2/ERF domain
SuperFamilySSF541713.53E-2149106IPR016177DNA-binding domain
PROSITE profilePS5103223.03749106IPR001471AP2/ERF domain
SMARTSM003803.7E-3549112IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.2E-3149108IPR001471AP2/ERF domain
PRINTSPR003673.3E-105061IPR001471AP2/ERF domain
PRINTSPR003673.3E-107288IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0006339anatomyjuvenile vascular leaf
PO:0006340anatomyadult vascular leaf
PO:0008018anatomytransition vascular leaf
PO:0009025anatomyvascular leaf
PO:0009089anatomyendosperm
PO:0020040anatomyleaf base
PO:0025142anatomyleaf tip
PO:0001052developmental stagevascular leaf expansion stage
PO:0001053developmental stagevascular leaf post-expansion stage
PO:0007001developmental stageearly whole plant fruit ripening stage
PO:0007063developmental stageLP.07 seven leaves visible stage
PO:0007633developmental stageendosperm development stage
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
MPDRAESSPA SSREASSSPP LSATETAARR SASGCGKRAR ARDGEKHPSY RGVRMRAWGK  60
WVSEIREPRK KSRIWLGTFP TPEMAARAHD AAALVVKGPA AVLNFPEMAA ALPRPATAAP  120
RDVQAAAVRA AAMEPSMMLG PTAPLPRSAL APVKGQVHDD ELEAIVELPP LDEDFSELLV  180
PLGTASFSFH DATQASWRDP EWIDHDAGYM AAARDADELF GFGPDGDHGW AQPFGSTFLW  240
NM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-1844106972Ethylene-responsive transcription factor ERF096
Search in ModeBase
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G047918
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G047918_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7276670.0KJ727667.1 Zea mays clone pUT5594 AP2-EREBP transcription factor (EREB191) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008645616.11e-173ethylene-responsive transcription factor TINY
TrEMBLA0A060D6D01e-171A0A060D6D0_MAIZE; AP2-EREBP transcription factor (Fragment)
STRINGGRMZM2G047918_P011e-172(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15935354
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.12e-31ERF family protein