PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G057116_P02
Common NameZEAMMB73_750992, Zm.82925
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family WRKY
Protein Properties Length: 114aa    MW: 12492.9 Da    PI: 9.1922
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G057116_P02genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY49.96.4e-1636742159
                       -EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY 21 prsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
                        r+YYrC+s+gC vkk+ver+++dp++v++tY g Hnh 
  GRMZM2G057116_P02 36 CRNYYRCSSEGCGVKKRVERDRDDPRYVITTYDGVHNHA 74
                       59************************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007745.2E-92775IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.6E-163276IPR003657WRKY domain
SuperFamilySSF1182901.06E-133676IPR003657WRKY domain
PfamPF031064.5E-123673IPR003657WRKY domain
PROSITE profilePS5081118.7973776IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009867Biological Processjasmonic acid mediated signaling pathway
GO:0050832Biological Processdefense response to fungus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0006339anatomyjuvenile vascular leaf
PO:0006340anatomyadult vascular leaf
PO:0006341anatomyprimary shoot system
PO:0008018anatomytransition vascular leaf
PO:0009025anatomyvascular leaf
PO:0009054anatomyinflorescence bract
PO:0009084anatomypericarp
PO:0020040anatomyleaf base
PO:0020127anatomyprimary root
PO:0020136anatomyear inflorescence
PO:0020142anatomystem internode
PO:0020148anatomyshoot apical meristem
PO:0025142anatomyleaf tip
PO:0025287anatomyseedling coleoptile
PO:0001052developmental stagevascular leaf expansion stage
PO:0001053developmental stagevascular leaf post-expansion stage
PO:0007001developmental stageearly whole plant fruit ripening stage
PO:0007003developmental stageIL.03 full inflorescence length reached stage
PO:0007015developmental stageradicle emergence stage
PO:0007045developmental stagecoleoptile emergence stage
PO:0007063developmental stageLP.07 seven leaves visible stage
PO:0007065developmental stageLP.05 five leaves visible stage
PO:0007072developmental stageLP.18 eighteen leaves visible stage
PO:0007094developmental stageLP.01 one leaf visible stage
PO:0007101developmental stageLP.09 nine leaves visible stage
PO:0007106developmental stageLP.03 three leaves visible stage
PO:0007112developmental stage1 main shoot growth stage
PO:0007116developmental stageLP.11 eleven leaves visible stage
Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    Send to blast
KPRQEQRDEL ILAKRNKNKK RNVYFVDADG LCTCPCRNYY RCSSEGCGVK KRVERDRDDP  60
RYVITTYDGV HNHASPGAAA IIVPYGSGGG NSGFYSPPHS GSPSATSYSG SLAF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11119LAKRNKNKK
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.829250.0glume
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G057116
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00531DAPTransfer from AT5G26170Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G057116_P02
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0357670.0BT035767.1 Zea mays full-length cDNA clone ZM_BFb0082I18 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001316724.12e-49uncharacterized protein LOC100193498
TrEMBLA0A3L6DPP46e-48A0A3L6DPP4_MAIZE; Putative WRKY transcription factor 50
TrEMBLC0P8386e-48C0P838_MAIZE; Putative WRKY transcription factor 50
STRINGGRMZM2G057116_P019e-49(Zea mays)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.14e-18WRKY DNA-binding protein 51