PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G060249_P01
Common NameEREB75, LOC100383131
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family ERF
Protein Properties Length: 155aa    MW: 17277.4 Da    PI: 12.5343
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G060249_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP222.13.8e-074060122
                AP2  1 sgykGVrwdkkrgrWvAeIrdp 22
                       ++y GVr+++ +gr++AeIrdp
  GRMZM2G060249_P01 40 TRYLGVRRRP-WGRYAAEIRDP 60
                       5799******.**********7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.104.3E-84165IPR001471AP2/ERF domain
PROSITE profilePS510329.4144169IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-54166IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    Send to blast
MFPWGGFGSE QRSAGEQRRC VLRSWARPLV AQPQADANTT RYLGVRRRPW GRYAAEIRDP  60
ATKDTTVSRA PSAAPTRAPT SPTRTSRRAP PSRPTSPRTT PRATTPRSSS SHSTPPTQPP  120
RLYHRRSRPR TTRQATAIVS RTCPLSWTTS PYPTT
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.521510.0meristem| shoot
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G060249
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G060249_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY6644150.0AY664415.1 Zea mays cultivar B73 locus 9009, complete sequence.
GenBankBT0662930.0BT066293.2 Zea mays full-length cDNA clone ZM_BFc0178I24 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023156478.19e-18uncharacterized protein LOC111589793
TrEMBLC0PDC42e-99C0PDC4_MAIZE; Uncharacterized protein
STRINGGRMZM2G060249_P011e-100(Zea mays)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.12e-10ERF family protein