PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G068967_P01
Common NameEREB97, Zm.101306
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family ERF
Protein Properties Length: 222aa    MW: 22931.2 Da    PI: 10.2255
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G068967_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.31.1e-191767155
                AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                       ++y+GVr ++ +gr++AeIrdp     r +r++lg+f+tae Aa+a++aa++ ++g
  GRMZM2G068967_P01 17 PRYRGVRKRP-WGRYAAEIRDP---A-RkARVWLGTFDTAEAAARAYDAAALHFRG 67
                       68********.**********8...2.35***********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.67E-201776No hitNo description
PfamPF008477.7E-141767IPR001471AP2/ERF domain
SMARTSM003808.1E-361881IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.2E-321875IPR001471AP2/ERF domain
SuperFamilySSF541711.63E-221876IPR016177DNA-binding domain
PROSITE profilePS5103224.9611875IPR001471AP2/ERF domain
PRINTSPR003674.8E-111930IPR001471AP2/ERF domain
PRINTSPR003674.8E-114157IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0006310anatomytassel floret
PO:0006341anatomyprimary shoot system
PO:0009001anatomyfruit
PO:0009066anatomyanther
PO:0009089anatomyendosperm
PO:0020142anatomystem internode
PO:0001007developmental stagepollen development stage
PO:0001094developmental stageplant embryo coleoptilar stage
PO:0001095developmental stageplant embryo true leaf formation stage
PO:0007001developmental stageearly whole plant fruit ripening stage
PO:0007031developmental stagemid whole plant fruit ripening stage
PO:0007063developmental stageLP.07 seven leaves visible stage
PO:0007094developmental stageLP.01 one leaf visible stage
PO:0007633developmental stageendosperm development stage
PO:0021004developmental stageinflorescence initiation stage
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MAPKNALPAA SGMTLEPRYR GVRKRPWGRY AAEIRDPARK ARVWLGTFDT AEAAARAYDA  60
AALHFRGPKA KTNFPVAFAT ATATDTRALP LPLRLPLPPP PPPKKLAVSP SGSTVESSSR  120
DSPAAPAPAP SLDLSLGMPP MVAAQPFLFL DPRLAVTVAV AAPVPRRPTA AAAGAGASKQ  180
AAYSCCREDE QSDTGSSSSV VDASPAVGVG FDLNMPPPGE VA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A7e-211976664ATERF1
3gcc_A7e-211976664ATERF1
5wx9_A8e-2118841481Ethylene-responsive transcription factor ERF096
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.1013060.0ovary
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G068967
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G068967_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0857090.0BT085709.1 Zea mays full-length cDNA clone ZM_BFc0050D08 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001147685.21e-153uncharacterized protein LOC100281295
TrEMBLC4J4G21e-152C4J4G2_MAIZE; AP2-EREBP transcription factor
STRINGGRMZM2G068967_P011e-152(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118532537
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20310.16e-24ethylene response factor 7