PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G069082_P01
Common NameEREB36, LOC100272507
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family ERF
Protein Properties Length: 246aa    MW: 25948.1 Da    PI: 7.0066
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G069082_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2483.1e-1552102153
                AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkl 53 
                        + ++GVr++   grWv+e+r+p   g + +r +lg++  ae Aa+a++aa+++l
  GRMZM2G069082_P01  52 PVFRGVRRRGAAGRWVCEVRVP---GrRGARLWLGTYLGAEAAARAHDAAMLAL 102
                        579******************9...6455**********************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.1E-1052102IPR001471AP2/ERF domain
PROSITE profilePS5103220.16553112IPR001471AP2/ERF domain
SMARTSM003807.3E-1353118IPR001471AP2/ERF domain
SuperFamilySSF541712.88E-1653114IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.8E-2553114IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    Send to blast
MDMGRHQLQL QHAASSSSTS ASSSSEQDKP LCCSGPKKRP AGRTKFRETR HPVFRGVRRR  60
GAAGRWVCEV RVPGRRGARL WLGTYLGAEA AARAHDAAML ALGRGAACLN FPDSAWLLAV  120
PPPPALSGGL DGARRAALEA VAEFQRRRFG AAAADEATSG TSPPSSSSSA TKPAPAIERV  180
PVEASETVAL DGAVFEPDWF GDMDLDLYYA SLAEGLLVEP PPPPPPAAWD HGDCCDSGAD  240
VALWSY
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.1005840.0meristem
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G069082
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription (By similarity). {ECO:0000250}.
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G069082_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0388550.0BT038855.1 Zea mays full-length cDNA clone ZM_BFb0336G21 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001140448.11e-176uncharacterized protein LOC100272507
SwissprotA2Z3883e-59DRE1H_ORYSI; Dehydration-responsive element-binding protein 1H
SwissprotQ0J0903e-59DRE1H_ORYSJ; Dehydration-responsive element-binding protein 1H
TrEMBLA0A3L6DZF91e-174A0A3L6DZF9_MAIZE; Dehydration-responsive element-binding protein 1H
TrEMBLB4FP171e-174B4FP17_MAIZE; AP2-EREBP transcription factor
STRINGGRMZM2G069082_P011e-175(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19636261
Representative plantOGRP6456520
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.12e-14C-repeat/DRE binding factor 2