PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G072376_P01
Common NamebHLH56
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bHLH
Protein Properties Length: 229aa    MW: 24492.5 Da    PI: 6.7541
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G072376_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.43.3e-10184211330
                        HHHHHHHHHHHHHHHHHHHHHHCTSCCC CS
                HLH   3 rahnerErrRRdriNsafeeLrellPka 30 
                        r+h+e+ErrRR+riN  +++Lr+llP+ 
  GRMZM2G072376_P01 184 RSHSEAERRRRERINAHLARLRSLLPNT 211
                        78************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.242181229IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.29E-8184217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-7184211IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-7184211IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MGGHGDHHRR RRQEVEVLVH DDDEDLEHQS RACGGGATSG VVVEQGAGDG GGQAASSSLG  60
SVSAATMAPP QIFCWPPQHH HNSSNDVGGG QQPPFFPPLP PLPPTPPPFF ADLYARRALQ  120
LAYDHHHPGG GPSTSSDPLG LYMAGGGSGM MMMPPPFASS LPFGDFGRMT AQEIMDAKAL  180
AASRSHSEAE RRRRERINAH LARLRSLLPN TTKVLILIII DDITHARIE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1189194ERRRRE
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G072376
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G072376_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7268860.0KJ726886.1 Zea mays clone pUT3427 bHLH transcription factor (bHLH56) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008653882.11e-156transcription factor bHLH30
TrEMBLA0A060CYS41e-165A0A060CYS4_MAIZE; BHLH transcription factor (Fragment)
STRINGGRMZM2G072376_P011e-166(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19183898
Representative plantOGRP37715106