PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G073047_P01
Common NameLOC103638592, ZEAMMB73_158694, Zm.129424
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family ERF
Protein Properties Length: 242aa    MW: 25626.1 Da    PI: 4.6831
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G073047_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.81.1e-173681352
                AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52
                       y+GVr +  +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++aa++ 
  GRMZM2G073047_P01 36 YRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDAAALV 81
                       9****998.**********843...6*********************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.7E-123480IPR001471AP2/ERF domain
SMARTSM003802.0E-343598IPR001471AP2/ERF domain
SuperFamilySSF541713.73E-213592IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.6E-313594IPR001471AP2/ERF domain
PROSITE profilePS5103223.3273592IPR001471AP2/ERF domain
CDDcd000189.01E-223693No hitNo description
PRINTSPR003671.1E-103647IPR001471AP2/ERF domain
PRINTSPR003671.1E-105874IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
MPDSDVPSPA SSPLGSVQKI ARGRKSRRGG GRSPAYRGVR MRAWGKWVSE IREPRKKSRI  60
WLGTFPTAEM AARAHDAAAL VVKGRGAVLN FPEMAASLPR PASAAPRDVQ AAAARAAAMD  120
VPVGAAEPLP SSSPQQVLGQ PLVVGDPDVE LLEEIVELPL IDEDVMASDD VFCWTASFHD  180
CAADDPLSYE PNAWMQAGGS IAAQVAEMMV PGTGLATDQL WTAQPDGIMP SELGAFLWNP  240
CS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-173093973Ethylene-responsive transcription factor ERF096
Search in ModeBase
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G073047
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G073047_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9745750.0EU974575.1 Zea mays clone 453357 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008659689.11e-173ethylene-responsive transcription factor TINY
TrEMBLA0A3L6DHA61e-172A0A3L6DHA6_MAIZE; Ethylene-responsive transcription factor ERF043
TrEMBLK7V9X41e-172K7V9X4_MAIZE; Putative AP2/EREBP transcription factor superfamily protein
STRINGGRMZM2G073047_P011e-173(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15935354
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32800.12e-24ERF family protein