PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G073427_P01
Common Namegpm349
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 188aa    MW: 21625.4 Da    PI: 11.9217
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G073427_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.32.4e-11150182436
                        XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvk 36 
                         k+ rr+ +NRe+ArrsR+RK+a +  Le  v 
  GRMZM2G073427_P01 150 AKKMRRMVSNRESARRSRKRKQAHLTDLESQVS 182
                        799**************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF001706.9E-10149182IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.818149188IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.8E-8151182No hitNo description
SuperFamilySSF579593.84E-9151184No hitNo description
CDDcd147027.59E-10152182No hitNo description
PROSITE patternPS000360154169IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    Send to blast
TVSPLATERS INTTAGINAA PLRPPPRPTL LRLLPTPILP LPEYEVLERE RLSSKNGGWR  60
RRRRRRGGGE LRRQRRRRPR RIRRGAQEEA RPVLRRRRQI HGDIDGASLV TNSNVIEDDD  120
FQGKPTNSGT SKELSDDDGD LEENTDPANA KKMRRMVSNR ESARRSRKRK QAHLTDLESQ  180
VSIVLEYR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15965RRRRRRR
25977RRRRRRRGGGELRRQRRRR
36178RRRRRGGGELRRQRRRRP
46478RRGGGELRRQRRRRP
57176RRQRRR
67279RQRRRRPR
77597RRRPRRIRRGAQEEARPVLRRRR
8163169RRSRKRK
9163170RRSRKRKQ
10165170SRKRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.93860.0leaf| meristem| shoot
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G073427
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G073427_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9433240.0EU943324.1 Zea mays clone 1599689 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021302283.12e-64light-inducible protein CPRF2 isoform X1
TrEMBLA0A368QN272e-50A0A368QN27_SETIT; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.13e-11basic leucine zipper 9