PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GRMZM2G080111_P01

Organism

Zea mays

Taxonomic ID

4577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea

Family

bZIP

Protein Properties

Length: 168aa MW: 18767.2 Da PI: 6.5301

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GRMZM2G080111_P01	genome	MaizeSequence	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	39.9	9.3e-13	77	129	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 ++ rr+++NRe+ArrsR RK+ ++ eL v+eL + N++L el++ + ++a GRMZM2G080111_P01 77 RKKRRLASNRESARRSRVRKQRRLYELSLQVAELLGTNQRLLVELNHVTAKYA 129 5789*******************************************998887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.8E-8	73	130	No hit	No description
SMART	SM00338	9.5E-12	73	137	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.266	75	138	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	2.1E-9	77	129	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.27E-9	77	129	No hit	No description
PROSITE pattern	PS00036	0	80	95	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 168 aa Download sequence Send to blast
MQQNWAADLA CLPGLDLGSL FLPQNDDPMY DFSTFDMVDL DPYPCSCNGS VTTTTVSSVS 60 AAAADKHQER RGNDVERKKR RLASNRESAR RSRVRKQRRL YELSLQVAEL LGTNQRLLVE 120 LNHVTAKYAL LARENAKLRE EAAGLQRRLS EMELMGEAEA AALSPEVA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	89	95	RRSRVRK
2	89	96	RRSRVRKQ

Expression -- Microarray ? help Back to Top
Source	ID
Expression Atlas	GRMZM2G080111

Cis-element ? help Back to Top
Source	Link
PlantRegMap	GRMZM2G080111_P01

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008645357.1	1e-120	basic leucine zipper 8
TrEMBL	A0A1D6H348	1e-119	A0A1D6H348_MAIZE; Basic leucine-zipper 58
TrEMBL	A0A3L6ESZ2	1e-119	A0A3L6ESZ2_MAIZE; Uncharacterized protein
STRING	GRMZM2G080111_P01	1e-120	(Zea mays)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP12742	27	35
Representative plant	OGRP16905	3	3

Link Out ? help Back to Top
Phytozome	GRMZM2G080111_P01
Entrez Gene	103626765