PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G089995_P01
Common NameEREB209, LOC100304148, ZEAMMB73_289765, Zm.21746
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family ERF
Protein Properties Length: 203aa    MW: 20753.4 Da    PI: 7.3513
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G089995_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.21.3e-201767256
                AP2  2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56
                       + +GVr ++ +gr++AeIrd +     r +r++lg+f+t+e+Aa+a++aa++kl+g+
  GRMZM2G089995_P01 17 RLRGVRKRP-WGRYAAEIRDpV-----RkARVWLGTFDTPEQAARAYDAAARKLRGP 67
                       679******.**********44.....55**************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.72E-181675No hitNo description
PfamPF008473.1E-141666IPR001471AP2/ERF domain
SuperFamilySSF541713.07E-211774IPR016177DNA-binding domain
SMARTSM003802.6E-301780IPR001471AP2/ERF domain
PROSITE profilePS5103223.3141774IPR001471AP2/ERF domain
PRINTSPR003671.1E-91829IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.4E-291974IPR001471AP2/ERF domain
PRINTSPR003671.1E-94056IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    Send to blast
MAPKRPVSAA AAAEQPRLRG VRKRPWGRYA AEIRDPVRKA RVWLGTFDTP EQAARAYDAA  60
ARKLRGPGAA TNYPAPEPTA EALAEAPAAS GSGSAVVYES SSASASASSC SLPLAAPSLD  120
LSLALPAAAA AAEPYQLFAD PAAAAAVTPA LLHFLPPKSE EQQSYSGSSS LSSSSSSVVF  180
DAAPPVGLRL DLNLALPPAE MVM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A9e-211074772Ethylene-responsive transcription factor ERF096
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.1395360.0meristem| ovary
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G089995
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G089995_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9701530.0EU970153.1 Zea mays clone 340982 ethylene-responsive transcription factor 4 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001159091.21e-136uncharacterized protein LOC100304148
TrEMBLB6TYT81e-134B6TYT8_MAIZE; AP2-EREBP transcription factor
STRINGGRMZM2G089995_P011e-135(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP144461025
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20310.12e-20ethylene response factor 7
Publications ? help Back to Top
  1. Alexandrov NN, et al.
    Insights into corn genes derived from large-scale cDNA sequencing.
    Plant Mol. Biol., 2009. 69(1-2): p. 179-94
    [PMID:18937034]