PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G097182_P01
Common NameEREB141, LOC103650692
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family ERF
Protein Properties Length: 245aa    MW: 26300.4 Da    PI: 6.7824
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G097182_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.59.2e-154395156
                AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56
                       + y+GVr +    rWv+e+r+p     +  +r++lg++ t+e+Aa+a++ a+ +l+g+
  GRMZM2G097182_P01 43 PVYRGVRARAGGTRWVCEVREP-----QaqARIWLGTYPTPEMAARAHDVAAIALRGA 95
                       68*****9999889****9999.....446*************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.6E-114394IPR001471AP2/ERF domain
PROSITE profilePS5103220.94344103IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.4E-2644105IPR001471AP2/ERF domain
SMARTSM003803.3E-2444109IPR001471AP2/ERF domain
SuperFamilySSF541711.37E-1644105IPR016177DNA-binding domain
CDDcd000183.28E-2145105No hitNo description
PRINTSPR003671.1E-54556IPR001471AP2/ERF domain
PRINTSPR003671.1E-56884IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MDADDSSYAS SSSFSPPPSP ADHLRLPPKR RAGRKKFRET RHPVYRGVRA RAGGTRWVCE  60
VREPQAQARI WLGTYPTPEM AARAHDVAAI ALRGATAADL NFPDSAHALP RARTAAPDDI  120
RRAAAQAAEL YRPSPSSSSA SGLLLHHGRR TIAAPPPPLS LPPPEASSTC CWTTSTGTRG  180
AGTTPTCCDG FLDEDSIFDM PGLIHDMAWG MLLTPPAMGR GLDWGALDDD DDHSHVDCTL  240
WTLDG
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G097182
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Mostly expressed in developing seeds and apices. {ECO:0000269|PubMed:17136305}.
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription (By similarity). {ECO:0000250}.
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription. {ECO:0000269|PubMed:17136305}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00557DAPTransfer from AT5G51990Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G097182_P01
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By calcium ion, methyl-jasmonate (MeJA), cold, drought, and high salinity stress. {ECO:0000269|PubMed:17136305}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7276710.0KJ727671.1 Zea mays clone pUT5598 AP2-EREBP transcription factor (EREB141) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008674480.11e-175dehydration-responsive element-binding protein 1F
SwissprotA2WZI43e-76DRE1F_ORYSI; Dehydration-responsive element-binding protein 1F
SwissprotQ8S9Z53e-76DRE1F_ORYSJ; Dehydration-responsive element-binding protein 1F
TrEMBLA0A060D1091e-174A0A060D109_MAIZE; AP2-EREBP transcription factor (Fragment)
TrEMBLA0A3L6FH281e-174A0A3L6FH28_MAIZE; Dehydration-responsive element-binding protein 1F
STRINGGRMZM2G097182_P011e-175(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19636261
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.16e-43C-repeat-binding factor 4
Publications ? help Back to Top
  1. Wang Q, et al.
    Overexpression of a rice OsDREB1F gene increases salt, drought, and low temperature tolerance in both Arabidopsis and rice.
    Plant Mol. Biol., 2008. 67(6): p. 589-602
    [PMID:18470484]
  2. Liu HH,Wang YG,Wang SP,Li HJ
    Cloning and characterization of peanut allene oxide cyclase gene involved in salt-stressed responses.
    Genet. Mol. Res., 2015. 14(1): p. 2331-40
    [PMID:25867379]