PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G111504_P01
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 200aa    MW: 21716.8 Da    PI: 11.4993
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G111504_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_124.94.5e-08156193541
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvk.eLeae 41 
                        +r++r++kNRe+A  sR RK+a +ee    ++ +L+ae
  GRMZM2G111504_P01 156 QRQKRMIKNRESAASSRDRKQAALEEILYQFEeKLQAE 193
                        89**********************99655554145555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.9E-6151196No hitNo description
SuperFamilySSF579592.31E-5157188No hitNo description
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0006310anatomytassel floret
PO:0006339anatomyjuvenile vascular leaf
PO:0006340anatomyadult vascular leaf
PO:0006341anatomyprimary shoot system
PO:0009001anatomyfruit
PO:0009025anatomyvascular leaf
PO:0009066anatomyanther
PO:0020040anatomyleaf base
PO:0020126anatomytassel inflorescence
PO:0020127anatomyprimary root
PO:0020142anatomystem internode
PO:0001007developmental stagepollen development stage
PO:0001009developmental stageD pollen mother cell meiosis stage
PO:0001052developmental stagevascular leaf expansion stage
PO:0001053developmental stagevascular leaf post-expansion stage
PO:0001180developmental stageplant proembryo stage
PO:0007032developmental stagewhole plant fruit formation stage up to 10%
PO:0007065developmental stageLP.05 five leaves visible stage
PO:0007072developmental stageLP.18 eighteen leaves visible stage
PO:0007094developmental stageLP.01 one leaf visible stage
PO:0007101developmental stageLP.09 nine leaves visible stage
PO:0007106developmental stageLP.03 three leaves visible stage
PO:0007112developmental stage1 main shoot growth stage
PO:0007116developmental stageLP.11 eleven leaves visible stage
PO:0007633developmental stageendosperm development stage
PO:0021004developmental stageinflorescence initiation stage
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    Send to blast
MPPAPTTGGA GEEPAILKAA LGSGKLRIEG YCRFISAGHP QGRKKKHRNN KYAEEWKVRA  60
CAGRLPSTLP PPKAPASAWR SPPWQPRRLR PGGRRRRCGR RSLPLEGSPR PSSLSLPLGF  120
PDGDGDAAGS VAGGVGGVRG GGKRALLDPA DRAVMQRQKR MIKNRESAAS SRDRKQAALE  180
EILYQFEEKL QAEREEAARK
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.319522e-89meristem| ovary| shoot| tassel
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G111504
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G111504_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9549715e-87EU954971.1 Zea mays clone 1497551 mRNA sequence.
GenBankEU9642555e-87EU964255.1 Zea mays clone 277330 G-box-binding factor 4 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGGRMZM2G111504_P011e-139(Zea mays)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.15e-09bZIP family protein