PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G113742_P02
Common NameLOC100272614
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family G2-like
Protein Properties Length: 189aa    MW: 21107 Da    PI: 10.2662
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G113742_P02genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like33.11.2e-101233355
            G2-like 33 lelmkvkgLtlehvkSHLQkYRl 55
                       +++m+vkgLtl h+kSHLQkYRl
  GRMZM2G113742_P02  1 MRTMGVKGLTLFHLKSHLQKYRL 23
                       689*******************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.608.6E-10124IPR009057Homeodomain-like
PfamPF143791.4E-2264109IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MRTMGVKGLT LFHLKSHLQK YRLGRQSGKE LTEQSKDASY LMEAQSGTTL SPRGSTPDVK  60
ESQEVKEALR AQMEVQRRLH EQVEVQKHMQ IRMEANQKYI DTILDKAFKI VSEQLSGFSI  120
SDQDLPILTS ARAMLSPADH LSSSVFPQLS VSSVSLHNPG PGGGKGLPHV ADSHVFSQRP  180
PEQFKRKSR
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.266500.0ear| embryo| endosperm| meristem| shoot| tassel
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G113742
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator (PubMed:26586833). Acts redundantly with PHR1 as a key component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). {ECO:0000269|PubMed:26586833}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G113742_P02
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated in roots by low Pi. {ECO:0000269|PubMed:26586833}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0390530.0BT039053.1 Zea mays full-length cDNA clone ZM_BFb0367F20 mRNA, complete cds.
GenBankEU9678390.0EU967839.1 Zea mays clone 306497 myb family transcription factor-related protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001140549.11e-134uncharacterized protein LOC100272614
SwissprotQ94A572e-41PHL2_ARATH; Protein PHR1-LIKE 2
TrEMBLA0A317Y4C31e-133A0A317Y4C3_MAIZE; Protein PHR1-LIKE 3
TrEMBLB4FPL51e-133B4FPL5_MAIZE; Myb family transcription factor-related protein
TrEMBLK4JFL61e-133K4JFL6_MAIZE; G2-like transcription factor (Fragment)
STRINGGRMZM2G113742_P011e-134(Zea mays)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24120.14e-43G2-like family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]