PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G117193_P03
Common NameZm.19190
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family G2-like
Protein Properties Length: 495aa    MW: 53169.3 Da    PI: 7.4494
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G117193_P03genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like30.11.1e-09177200225
            G2-like   2 prlrWtpeLHerFveaveqLGGse 25 
                        +rlrWt +LH rFv av+qLGG++
  GRMZM2G117193_P03 177 ARLRWTRQLHGRFVLAVAQLGGAD 200
                        7*********************97 PP
2G2-like461.2e-142432722655
            G2-like  26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                        +AtPk+++++m v gLtl+h+kSHLQ+YRl
  GRMZM2G117193_P03 243 EATPKSVMRAMAVSGLTLYHLKSHLQRYRL 272
                        7****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.1E-27174201IPR009057Homeodomain-like
TIGRFAMsTIGR015571.3E-8242273IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.602.1E-27244276IPR009057Homeodomain-like
PfamPF143792.8E-10322365IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0000037anatomyshoot apex
PO:0006339anatomyjuvenile vascular leaf
PO:0006340anatomyadult vascular leaf
PO:0006354anatomyear floret
PO:0006505anatomycentral spike of ear inflorescence
PO:0008018anatomytransition vascular leaf
PO:0009001anatomyfruit
PO:0009009anatomyplant embryo
PO:0009025anatomyvascular leaf
PO:0009074anatomystyle
PO:0020040anatomyleaf base
PO:0020104anatomyleaf sheath
PO:0020126anatomytassel inflorescence
PO:0020127anatomyprimary root
PO:0020142anatomystem internode
PO:0020148anatomyshoot apical meristem
PO:0025142anatomyleaf tip
PO:0001007developmental stagepollen development stage
PO:0001052developmental stagevascular leaf expansion stage
PO:0001053developmental stagevascular leaf post-expansion stage
PO:0001083developmental stageinflorescence development stage
PO:0001095developmental stageplant embryo true leaf formation stage
PO:0001180developmental stageplant proembryo stage
PO:0007006developmental stageIL.00 inflorescence just visible stage
PO:0007015developmental stageradicle emergence stage
PO:0007016developmental stagewhole plant flowering stage
PO:0007031developmental stagemid whole plant fruit ripening stage
PO:0007032developmental stagewhole plant fruit formation stage up to 10%
PO:0007063developmental stageLP.07 seven leaves visible stage
PO:0007065developmental stageLP.05 five leaves visible stage
PO:0007072developmental stageLP.18 eighteen leaves visible stage
PO:0007101developmental stageLP.09 nine leaves visible stage
PO:0007104developmental stageLP.15 fifteen leaves visible stage
PO:0007106developmental stageLP.03 three leaves visible stage
PO:0007112developmental stage1 main shoot growth stage
PO:0007116developmental stageLP.11 eleven leaves visible stage
PO:0007123developmental stageLP.06 six leaves visible stage
PO:0021004developmental stageinflorescence initiation stage
Sequence ? help Back to Top
Protein Sequence    Length: 495 aa     Download sequence    Send to blast
MEDAKEDAAM VPWPGLALAP SCLTRHIPLP CPPIRPRAYP SIHTYAAARC RWRRNISERC  60
SGGVTRKEPT GRLSIRAPAQ LAVASGIRSI TLLLLLLLSL VGQEHTSCLL CRRRRSSRAL  120
SSSSRPRRDH SGGCCCLSCW PRHRRFCDTI RSAAAGTLEM SSLGGQQQHG RGDEARARLR  180
WTRQLHGRFV LAVAQLGGAD SEFLSSKSSA HELAARACPV LSLTACLNAT TTDVGFRYQN  240
IAEATPKSVM RAMAVSGLTL YHLKSHLQRY RLAVSQGTAS PVGEGDNGGG ANERSSSSES  300
QLDEYDDGSV ADLHGDSSGS MAARVQREAK RKRHEQMQIE VQRHLQLRIE AQGRYMQSVL  360
RRAQEALADH ILGSPATGAE AELSELASAV ETGTGCLSST SCCSTSPSPM RHRSADSCVT  420
SSSSSSSSEA ESQAPAGANT CAGTRDCSVE RPVQGEESTF LQRHEDEDEA EEADVGAAAA  480
AEDEDGTSSE IDLNR
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.191900.0ear| embryo
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G117193
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G117193_P03
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0421630.0BT042163.1 Zea mays full-length cDNA clone ZM_BFb0149M03 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023157342.10.0uncharacterized protein LOC100274073 isoform X1
RefseqXP_023157344.10.0uncharacterized protein LOC100274073 isoform X1
RefseqXP_023157345.10.0uncharacterized protein LOC100274073 isoform X1
RefseqXP_023157347.10.0uncharacterized protein LOC100274073 isoform X1
TrEMBLA0A317YLI00.0A0A317YLI0_MAIZE; Myb-related protein 2
STRINGGRMZM2G117193_P030.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP112643038
Representative plantOGRP7817262
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04030.32e-30G2-like family protein