PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GRMZM2G144480_P01

Common Name

ZEAMMB73_391442

Organism

Zea mays

Taxonomic ID

4577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea

Family

bZIP

Protein Properties

Length: 172aa MW: 19293.5 Da PI: 10.1567

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GRMZM2G144480_P01	genome	MaizeSequence	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.9	1.6e-11	92	147	5	60
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 +r rr+ +NRe+ArrsR RK+ ++ eL v L + N++L + l++ +a + GRMZM2G144480_P01 92 RRRRRMVSNRESARRSRVRKQRQLSELWAQVSHLRGANRRLLDDLNRALRSCADAR 147 799****************************************9999877777655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	8.7E-9	87	152	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.094	90	153	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	5.3E-9	91	145	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	9.7E-9	92	165	No hit	No description
SuperFamily	SSF57959	5.06E-10	92	140	No hit	No description
PROSITE pattern	PS00036	0	95	110	IPR004827	Basic-leucine zipper domain
CDD	cd14702	4.79E-13	97	144	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence Send to blast
MYHHHFHGEV DSLRFLSPPT TASFAAAHHQ HMNMPLPPPA YYLAIDGDAA CFDELDTIVR 60 EAAAHLGGNS NNESPSLSGS GSDSAAAADQ ERRRRRMVSN RESARRSRVR KQRQLSELWA 120 QVSHLRGANR RLLDDLNRAL RSCADARREN ARLRDEKAQL ANRLHQLLII AG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	104	110	RRSRVRK
2	104	111	RRSRVRKQ

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Zm.49800	1e-87	shoot

Expression -- Microarray ? help Back to Top
Source	ID
Expression Atlas	GRMZM2G144480

Cis-element ? help Back to Top
Source	Link
PlantRegMap	GRMZM2G144480_P01

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	EU976632	3e-85	EU976632.1 Zea mays clone 985663 bZIP protein mRNA, complete cds.
GenBank	KJ727510	3e-85	KJ727510.1 Zea mays clone pUT5369 bZIP transcription factor (bZIP126) gene, partial cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008679514.1	1e-122	basic leucine zipper 43
TrEMBL	A0A1D6QK71	6e-95	A0A1D6QK71_MAIZE; Putative bZIP transcription factor superfamily protein
STRING	GRMZM2G144480_P01	1e-122	(Zea mays)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1186	35	126
Representative plant	OGRP13025	4	5

Link Out ? help Back to Top
Phytozome	GRMZM2G144480_P01
Entrez Gene	103654461