PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G153144_P01
Common NameZm.28539
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 350aa    MW: 37324.5 Da    PI: 5.396
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G153144_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_168.98.2e-22247309163
                        XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                        e+elk+++rkq+NRe+ArrsR+RK+ae+eeL +++++L +eN++L+ ele+++ke+++l s++
  GRMZM2G153144_P01 247 ERELKKQKRKQSNRESARRSRLRKQAECEELGQRAETLRSENSSLRAELERIRKEYEQLLSQN 309
                        89**********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.1E-26193IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165965.0E-17124226No hitNo description
Gene3DG3DSA:1.20.5.1701.0E-16244308No hitNo description
PfamPF001704.3E-20247309IPR004827Basic-leucine zipper domain
SMARTSM003384.8E-21247311IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.265249312IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.13E-11250307No hitNo description
CDDcd147029.16E-25252302No hitNo description
PROSITE patternPS000360254269IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MGSNDPSTPS KASKDQPPAT TSSGTVSVYP EWPSFQAYQA IPPHGFFPPT VAANPQAHSY  60
MWGAQPMVPP YGTPPPPYVM YPPGAVYAHP STPPTMHPFS HYPMPTNGHA ETPGTAPSAP  120
EMNGKSEPGR TSAPSANGIT SHSESGSESE SEGSDANYEN DSHSKDNDGK EDGNSQNSIS  180
YSASQGVLNQ TMAMLPIQPG AMVGGVSSST ANLNIGVHYW EAPGSAAVSA THGKAPAGSA  240
RGDQWDEREL KKQKRKQSNR ESARRSRLRK QAECEELGQR AETLRSENSS LRAELERIRK  300
EYEQLLSQNA SLKEKLGGSS DPIPDMNEQN DGNGSDKKQS DSDAQPGSES
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1263269RRSRLRK
2263270RRSRLRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.285390.0meristem
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G153144
Functional Description ? help Back to Top
Source Description
UniProtBinds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G153144_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7282600.0KJ728260.1 Zea mays clone pUT6537 bZIP transcription factor (bZIP14) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008645201.10.0transcription factor HBP-1a isoform X2
SwissprotP239221e-130HBP1A_WHEAT; Transcription factor HBP-1a
TrEMBLA0A1D6GZE60.0A0A1D6GZE6_MAIZE; BZIP transcription factor 16
STRINGGRMZM2G153144_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21473796
Representative plantOGRP7001767
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32150.11e-58basic region/leucine zipper transcription factor 68
Publications ? help Back to Top
  1. Tabata T,Nakayama T,Mikami K,Iwabuchi M
    HBP-1a and HBP-1b: leucine zipper-type transcription factors of wheat.
    EMBO J., 1991. 10(6): p. 1459-67
    [PMID:2026143]
  2. Tabata T, et al.
    A protein that binds to a cis-acting element of wheat histone genes has a leucine zipper motif.
    Science, 1989. 245(4921): p. 965-7
    [PMID:2772648]
  3. Mikami K, et al.
    Developmental and tissue-specific regulation of the gene for the wheat basic/leucine zipper protein HBP-1a(17) in transgenic Arabidopsis plants.
    Mol. Gen. Genet., 1995. 248(5): p. 573-82
    [PMID:7476857]
  4. Nakayama T,Okanami M,Meshi T,Iwabuchi M
    Dissection of the wheat transcription factor HBP-1a(17) reveals a modular structure for the activation domain.
    Mol. Gen. Genet., 1997. 253(5): p. 553-61
    [PMID:9065688]
  5. Okanami M,Meshi T,Tamai H,Iwabuchi M
    HALF-1, a bZIP-type protein, interacting with the wheat transcription factor HBP-1a contains a novel transcriptional activation domain.
    Genes Cells, 1996. 1(1): p. 87-99
    [PMID:9078369]