PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G163418_P02
Common NameLOC100281358
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family WRKY
Protein Properties Length: 166aa    MW: 17564.8 Da    PI: 9.7787
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G163418_P02genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY30.38.7e-10133154122
                        ---SS-EEEEEEE--TT-SS-E CS
               WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                        ++Dg++WrKYGqKe+ g+++pr
  GRMZM2G163418_P02 133 VEDGHSWRKYGQKEILGAKHPR 154
                        58*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.7E-9120154IPR003657WRKY domain
PROSITE profilePS508119.89128166IPR003657WRKY domain
SuperFamilySSF1182902.48E-7131154IPR003657WRKY domain
SMARTSM007740.001133161IPR003657WRKY domain
PfamPF031064.5E-7134154IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    Send to blast
MASTEMEMGV VGGGVNSSGG GSCGGLVVTE LSHIKELVRQ LEVHLGGSPD LCKHLASQIF  60
SLTERSIGLI TSSNLDGARR QKRPAGDAGL ASPLSATPTS DVTDGPFQST KKKRKVMEQR  120
RQRVSSAGGE NPVEDGHSWR KYGQKEILGA KHPRLAGTHA SRSEMC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1110115KKKRKV
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.1587080.0meristem
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G163418
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G163418_P02
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0864140.0BT086414.2 Zea mays full-length cDNA clone ZM_BFc0163P05 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001351600.11e-106WRKY74 - superfamily of TFs having WRKY and zinc finger domains
TrEMBLA0A1D6EP521e-105A0A1D6EP52_MAIZE; WRKY74-superfamily of TFs having WRKY and zinc finger domains
STRINGGRMZM2G163418_P011e-106(Zea mays)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24110.12e-09WRKY DNA-binding protein 30