PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G171464_P01
Common NamebHLH131, ZEAMMB73_814989
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bHLH
Protein Properties Length: 205aa    MW: 23047.5 Da    PI: 11.459
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G171464_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.38.6e-11130167141
                        CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCH CS
                HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKa 41 
                        +r++h ++Er+RR+ +N+ ++ Lr+l+P++   + +++s a
  GRMZM2G171464_P01 130 QRMTHIAVERNRRRLMNDHLASLRSLIPSS---YIPRVSHA 167
                        79***************************8...66666655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.52E-9121165IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.38E-5128160No hitNo description
Gene3DG3DSA:4.10.280.104.3E-9128160IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.398129189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.5E-8130165IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MERMQLQGPI ASSLWTDKQQ VVASTSAAMA AQMPFLALLQ GAGVVVEGAE TEQQQYEHEH  60
DGRKRQALAR AVSKLDLLES CLTQAAAPAA AACAPVASRT TERRMKRPRT RARAAPPPEK  120
RRKPEEAESQ RMTHIAVERN RRRLMNDHLA SLRSLIPSSY IPRVSHAMQS PCMHAAFRFD  180
LTTQRLHAMQ CRATRLRWWA VRSTT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1130141RMTHIAVERNRR
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G171464
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G171464_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7279440.0KJ727944.1 Zea mays clone pUT6040 bHLH transcription factor (bHLH131) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002468617.24e-58transcription factor bHLH57, partial
TrEMBLK7WHF41e-146K7WHF4_MAIZE; BHLH transcription factor (Fragment)
STRINGGRMZM2G171464_P011e-147(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP79573344
Representative plantOGRP25315131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46810.16e-13bHLH family protein