PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G175543_P01
Common NameEREB19, LOC100384218
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family ERF
Protein Properties Length: 197aa    MW: 20603.6 Da    PI: 6.3539
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G175543_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11.1e-181665255
                AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       +y+GVr+++ +gr++AeIrdp    k++ ++lg+f++ae Aa+a++aa+++l+g
  GRMZM2G175543_P01 16 RYRGVRRRP-SGRYAAEIRDPA---KKTPIWLGTFDSAEAAARAYDAAARSLRG 65
                       59*******.7*********83...36*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103222.1681673IPR001471AP2/ERF domain
SuperFamilySSF541713.53E-211673IPR016177DNA-binding domain
PfamPF008476.2E-121665IPR001471AP2/ERF domain
SMARTSM003801.7E-321679IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.2E-291673IPR001471AP2/ERF domain
CDDcd000184.08E-171673No hitNo description
PRINTSPR003678.2E-81728IPR001471AP2/ERF domain
PRINTSPR003678.2E-83955IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    Send to blast
MRRAKPQQPS PSPEIRYRGV RRRPSGRYAA EIRDPAKKTP IWLGTFDSAE AAARAYDAAA  60
RSLRGPTART NFPGAAASAP RHRARSASAS AAAAAPAAVP ATSSHSSTVE SWSGGAPRVA  120
APPRSAAAPM EEDDDEDCHS YCGSSSSVLC EDARGDDDDD AAASHAPLPF DLNLPPPIDA  180
AAEADQMGAR YDTLLHL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-1916731472Ethylene-responsive transcription factor ERF096
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.307100.0meristem| shoot
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G175543
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G175543_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0695190.0BT069519.1 Zea mays full-length cDNA clone ZM_BFb0155J08 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001170261.11e-135uncharacterized protein LOC100384218
TrEMBLA0A3L6EBS61e-134A0A3L6EBS6_MAIZE; Ethylene-responsive transcription factor 7
TrEMBLC0PMK01e-134C0PMK0_MAIZE; AP2-EREBP transcription factor
STRINGGRMZM2G175543_P011e-135(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP61022347
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20310.18e-11ethylene response factor 7