PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GRMZM2G177046_P01

Common Name

LOC103644073

Organism

Zea mays

Taxonomic ID

4577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea

Family

bZIP

Protein Properties

Length: 185aa MW: 20188.1 Da PI: 11.0951

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GRMZM2G177046_P01	genome	MaizeSequence	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	38.8	2e-12	68	121	1	54
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 e++l+r+rrk +NR++A+rsR+RK++++eeL+e ++ L ae ++L +l+ l GRMZM2G177046_P01 68 EERLRRQRRKVSNRLSAQRSRARKQQRLEELREAAARLRAEKQQLEARLQALAR 121 789**********************************************99975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	3.9E-10	63	121	No hit	No description
SMART	SM00338	9.5E-8	68	132	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	4.2E-8	68	120	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.001	70	133	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.03E-7	71	123	No hit	No description
CDD	cd14702	1.83E-11	73	122	No hit	No description
PROSITE pattern	PS00036	0	75	90	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 185 aa Download sequence Send to blast
MLSVQEALDL ASSSCGTMDI TTCGFTPWGP ESCPSLEQVM ASRPAASSTA ALAEAEAEAA 60 RDADPEDEER LRRQRRKVSN RLSAQRSRAR KQQRLEELRE AAARLRAEKQ QLEARLQALA 120 RHDLAVRCQN ARLGAEASAL ARRFREARRL LALRRLAFAA LQPRPGVAPA PAPPAPLLGL 180 ASLMT

Expression -- Microarray ? help Back to Top
Source	ID
Expression Atlas	GRMZM2G177046

Cis-element ? help Back to Top
Source	Link
PlantRegMap	GRMZM2G177046_P01

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	EU957676	1e-164	EU957676.1 Zea mays clone 1603335 ocs element-binding factor 1 mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008665488.1	1e-123	ocs element-binding factor 1-like
TrEMBL	A0A1D6L661	1e-121	A0A1D6L661_MAIZE; Ocs element-binding factor 1
STRING	GRMZM2G177046_P01	1e-122	(Zea mays)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP13845	24	29
Representative plant	OGRP12644	4	5

Link Out ? help Back to Top
Phytozome	GRMZM2G177046_P01
Entrez Gene	103644073