PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G307152_P01
Common NameEREB63
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family ERF
Protein Properties Length: 178aa    MW: 18669.8 Da    PI: 9.9839
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G307152_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.52.9e-171868155
                AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       sgykGVr+++ +g+Wv+eIr+p   g r r +lg++ t+e Aa a++ a   l+g
  GRMZM2G307152_P01 18 SGYKGVRRRR-WGKWVSEIRVP---GSRERLWLGSYATPEAAAVAHDTAVYFLRG 68
                       89*****777.**********8...435*********************999997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.03E-171882No hitNo description
SuperFamilySSF541716.15E-171881IPR016177DNA-binding domain
PfamPF008472.1E-91868IPR001471AP2/ERF domain
PROSITE profilePS5103221.0221981IPR001471AP2/ERF domain
SMARTSM003801.6E-231987IPR001471AP2/ERF domain
PRINTSPR003673.0E-82031IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-242082IPR001471AP2/ERF domain
PRINTSPR003673.0E-84258IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0006340anatomyadult vascular leaf
PO:0006505anatomycentral spike of ear inflorescence
PO:0009025anatomyvascular leaf
PO:0025142anatomyleaf tip
PO:0001052developmental stagevascular leaf expansion stage
PO:0007006developmental stageIL.00 inflorescence just visible stage
PO:0007072developmental stageLP.18 eighteen leaves visible stage
PO:0007101developmental stageLP.09 nine leaves visible stage
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
MRRAEPVGEQ ADAERRMSGY KGVRRRRWGK WVSEIRVPGS RERLWLGSYA TPEAAAVAHD  60
TAVYFLRGGG GAGDVAALNF PERAAAAYGA GGRLSPRSVQ RVASDAGMAA DAQLVAARED  120
TRALRAGIGG GASARPRDRD AGDACAGRAH NASLHSTGAG REQPVSGEIS VDDMDILL
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G307152
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G307152_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7276760.0KJ727676.1 Zea mays clone pUT5603 AP2-EREBP transcription factor (EREB63) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001354077.11e-121uncharacterized protein LOC100280906
SwissprotQ9C9I81e-31ERF20_ARATH; Ethylene-responsive transcription factor ERF020
TrEMBLA0A060D1121e-120A0A060D112_MAIZE; AP2-EREBP transcription factor (Fragment)
STRINGGRMZM2G307152_P011e-121(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP64332951
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.15e-33ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]