PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GRMZM2G370026_P01

Common Name

LOC103640895

Organism

Zea mays

Taxonomic ID

4577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea

Family

bZIP

Protein Properties

Length: 187aa MW: 20099.5 Da PI: 11.7403

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GRMZM2G370026_P01	genome	MaizeSequence	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	39.2	1.6e-12	82	130	2	50
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 ++++r rr+++NRe+ArrsR+RK+ +eeL+ +++ L a N++L+ +l GRMZM2G370026_P01 82 ERRRRLRRRISNRESARRSRARKQRHLEELRGRAARLRAGNRDLAARLG 130 56899***************************************99875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.3E-6	79	145	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.6E-9	82	130	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.852	83	129	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	9.85E-9	85	130	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.6E-7	85	133	No hit	No description
PROSITE pattern	PS00036	0	88	103	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 187 aa Download sequence Send to blast
MAHQQQQFPT LSEWDPTLDL EALLSDIGFG LLGPDEPTTP ASASASPTDA TTSATPPEHD 60 ASASLTSAGP EAAAADENEL AERRRRLRRR ISNRESARRS RARKQRHLEE LRGRAARLRA 120 GNRDLAARLG GAQARAALAR LANARLRAEA GALARRLYAA RRALALRQVY AASGGSFDLQ 180 VLASLMA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	97	104	RRSRARKQ

Expression -- Microarray ? help Back to Top
Source	ID
Expression Atlas	GRMZM2G370026

Cis-element ? help Back to Top
Source	Link
PlantRegMap	GRMZM2G370026_P01

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008662569.1	1e-124	ocs element-binding factor 1-like
TrEMBL	A0A1D6KGU5	1e-123	A0A1D6KGU5_MAIZE; BZIP transcription factor family protein expressed
STRING	GRMZM2G370026_P01	1e-123	(Zea mays)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP15125	19	19
Representative plant	OGRP8744	8	15

Link Out ? help Back to Top
Phytozome	GRMZM2G370026_P01
Entrez Gene	103640895