PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G382029_P01
Common NameZEAMMB73_281837
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family MYB_related
Protein Properties Length: 234aa    MW: 25726.9 Da    PI: 9.3762
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G382029_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.88e-11134197147
                        TSSS-HHHHHHHHHHHHHTTTT...........-HHHHHHHHT......TTS-HHHHHHHHHHH CS
    Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...........tWktIartmg......kgRtlkqcksrwqky 47 
                        r+ WT+e++e+lv+a  ++ ++            W  Ia+t +       +Rt+kq+k++w +y
  GRMZM2G382029_P01 134 RLEWTKEDEEKLVNAWFMHSNDpisgnnksgssFWGQIAATYNstsdpiRHRTAKQLKDHWVTY 197
                        789**********************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500907.027129198IPR017877Myb-like domain
SuperFamilySSF466891.94E-6131200IPR009057Homeodomain-like
SMARTSM007171.2E-5133200IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.0E-7133198IPR009057Homeodomain-like
PfamPF002495.1E-7134197IPR001005SANT/Myb domain
CDDcd001672.72E-5136197No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MSASLPRALF PAARPPPYPY PYHLYQYPPS SYGQPPTSQA GIQASFPVRP YAPPPPAADG  60
SQASFQIPPY APPPYAPPPY GVPPYAPYAP PPYGAPHPYA PPTYGAPPPV APLSVGSENQ  120
AEENPVPKEK RPKRLEWTKE DEEKLVNAWF MHSNDPISGN NKSGSSFWGQ IAATYNSTSD  180
PIRHRTAKQL KDHWVTYNRE VTKFNGFYLP RRKVGVKAEL TNAMVNGCSN GELI
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.1037882e-83endosperm| meristem
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G382029
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G382029_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0417801e-78BT041780.1 Zea mays full-length cDNA clone ZM_BFb0053P10 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020404741.11e-136extensin
TrEMBLA0A1D6G1381e-106A0A1D6G138_MAIZE; Uncharacterized protein
TrEMBLA0A3L6EIR91e-106A0A3L6EIR9_MAIZE; Glutathione S-transferase T3
STRINGGRMZM2G382029_P011e-166(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP3263337