PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G421033_P01
Common NameEREB156, LOC100280932, ZEAMMB73_341087
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family ERF
Protein Properties Length: 233aa    MW: 25313.4 Da    PI: 9.7224
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G421033_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.72.2e-1658107255
                AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        +y+GVr +k +g+WvAeIr+p +   r+r++lg++ ta  Aa+a++ a  +l+g
  GRMZM2G421033_P01  58 QYRGVRMRK-WGKWVAEIREPHK---RTRIWLGSYATAVAAARAYDTAVFYLRG 107
                        69*****99.**********732...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.2E-3057116IPR001471AP2/ERF domain
SuperFamilySSF541711.83E-2158116IPR016177DNA-binding domain
CDDcd000181.07E-2058116No hitNo description
PROSITE profilePS5103222.73458115IPR001471AP2/ERF domain
SMARTSM003802.5E-3658121IPR001471AP2/ERF domain
PfamPF008477.1E-1058107IPR001471AP2/ERF domain
PRINTSPR003676.0E-125970IPR001471AP2/ERF domain
PRINTSPR003676.0E-1297117IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MMQGEYRSSI EESAAAAVAA AAAMAPLAAA AVKMEAEQAA MAAPQLGAAH QQTQPRRQYR  60
GVRMRKWGKW VAEIREPHKR TRIWLGSYAT AVAAARAYDT AVFYLRGRSA RLNFPEEIPS  120
FGLADGVDVG EHARDPAAAA AGGGGGCTLS AASIRKKAIE VGSRVDALQT GMVVPPPHHR  180
ERHRHHNHLP QLRVHAEEQQ EEEEQKPQRP AWSGRVKNPD LNRAPSPESS DAE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-1557120468ATERF1
3gcc_A3e-1557120468ATERF1
5wx9_A4e-15581271481Ethylene-responsive transcription factor ERF096
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.991290.0meristem| ovary
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G421033
Function -- GeneRIF ? help Back to Top
  1. Fusion proteins of GAL4 and the the CDS of EREB156 exhibit transcription activation in yeast. The subcellular location in maize is the nucleus. Over-expression of this gene in the endosperm results in enhanced promoter activity for two starch synthesis genes.
    [PMID: 27282997]
  2. Thus, ZmEREB156 positively modulates starch biosynthetic gene ZmSSIIIa via the synergistic effect of sucrose and ABA
    [PMID: 27282997]
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G421033_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9546800.0EU954680.1 Zea mays clone 1476761 dehydration responsive element binding protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001147324.11e-168uncharacterized protein LOC100280932
TrEMBLB6SPL51e-167B6SPL5_MAIZE; Dehydration responsive element binding protein
STRINGGRMZM2G421033_P011e-168(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP39433075
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23340.16e-31DREB and EAR motif protein 3
Publications ? help Back to Top
  1. Alexandrov NN, et al.
    Insights into corn genes derived from large-scale cDNA sequencing.
    Plant Mol. Biol., 2009. 69(1-2): p. 179-94
    [PMID:18937034]
  2. Huang H, et al.
    Sucrose and ABA regulate starch biosynthesis in maize through a novel transcription factor, ZmEREB156.
    Sci Rep, 2016. 6: p. 27590
    [PMID:27282997]