PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G433450_P01
Common NameZEAMMB73_172211
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family MYB_related
Protein Properties Length: 165aa    MW: 18115.8 Da    PI: 10.2186
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G433450_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.91.6e-1075982347
                       -HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqky 47
                       +W++Ia++++ gRt++++k++w+++
  GRMZM2G433450_P01 75 RWSKIAAKLP-GRTDNEIKNHWNTH 98
                       7*********.************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.4E-961108IPR009057Homeodomain-like
PROSITE profilePS500906.6677599IPR017877Myb-like domain
CDDcd001673.04E-87599No hitNo description
PfamPF002495.0E-87598IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.604.6E-1475116IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0000037anatomyshoot apex
PO:0006339anatomyjuvenile vascular leaf
PO:0006340anatomyadult vascular leaf
PO:0006505anatomycentral spike of ear inflorescence
PO:0008018anatomytransition vascular leaf
PO:0009001anatomyfruit
PO:0009009anatomyplant embryo
PO:0009025anatomyvascular leaf
PO:0009054anatomyinflorescence bract
PO:0009089anatomyendosperm
PO:0020040anatomyleaf base
PO:0020104anatomyleaf sheath
PO:0020126anatomytassel inflorescence
PO:0020136anatomyear inflorescence
PO:0020142anatomystem internode
PO:0020148anatomyshoot apical meristem
PO:0025142anatomyleaf tip
PO:0001007developmental stagepollen development stage
PO:0001052developmental stagevascular leaf expansion stage
PO:0001053developmental stagevascular leaf post-expansion stage
PO:0001083developmental stageinflorescence development stage
PO:0001095developmental stageplant embryo true leaf formation stage
PO:0001180developmental stageplant proembryo stage
PO:0007001developmental stageearly whole plant fruit ripening stage
PO:0007003developmental stageIL.03 full inflorescence length reached stage
PO:0007006developmental stageIL.00 inflorescence just visible stage
PO:0007016developmental stagewhole plant flowering stage
PO:0007031developmental stagemid whole plant fruit ripening stage
PO:0007032developmental stagewhole plant fruit formation stage up to 10%
PO:0007063developmental stageLP.07 seven leaves visible stage
PO:0007065developmental stageLP.05 five leaves visible stage
PO:0007072developmental stageLP.18 eighteen leaves visible stage
PO:0007101developmental stageLP.09 nine leaves visible stage
PO:0007104developmental stageLP.15 fifteen leaves visible stage
PO:0007116developmental stageLP.11 eleven leaves visible stage
PO:0007633developmental stageendosperm development stage
PO:0021004developmental stageinflorescence initiation stage
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    Send to blast
MDPQNQVPNA KMYMIYCNIS LLSIKAVRVA CLFWFCLSLA VGSSISVLPL RHQSEAPPQT  60
LTELPSQSTP SLVLRWSKIA AKLPGRTDNE IKNHWNTHIK KKLVKMGIDP ATHQPLANSK  120
AAASSQSTVT DESAKTSNTR KELSLKKDGS RREAPLSTDS SEQSS
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G433450
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G433450_P01
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020404815.14e-55protein ODORANT1-like
TrEMBLA0A3L6F3G63e-52A0A3L6F3G6_MAIZE; Protein ODORANT1
STRINGGRMZM2G433450_P011e-118(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP7938563
Representative plantOGRP5171784
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G22680.17e-24myb domain protein 85