PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G437481_P01
Common NameZEAMMB73_366316
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bHLH
Protein Properties Length: 223aa    MW: 24987.1 Da    PI: 9.8109
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G437481_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.54.2e-12155200655
                        HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +++Er RR ri +++ +L+ l+P+     +k  s a++L +Av++I+ Lq
  GRMZM2G437481_P01 155 SIAERERRTRISEKLRKLQALVPNM----DKQTSTADMLDLAVDHIRGLQ 200
                        689*********************7....688*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.475149199IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474599.03E-16152215IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.06E-12153204No hitNo description
Gene3DG3DSA:4.10.280.102.7E-14154213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-9155200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.3E-13155205IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0020127anatomyprimary root
PO:0020142anatomystem internode
PO:0007063developmental stageLP.07 seven leaves visible stage
PO:0007112developmental stage1 main shoot growth stage
PO:0021004developmental stageinflorescence initiation stage
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MKNRVMGGFP SDRVEVGGEV HHATRDYHKK MKSPLNLSKQ GALSQFSEHG FSDDLTNNVH  60
GIGHSKENIT TNNVSRPFTS GFSIGSWEDS NSIEFSNLAN KTGIHNNDDI IDNISNSYEL  120
QFGVAKEMAG LLQMQQDQVP FRVRAKRGCA THPRSIAERE RRTRISEKLR KLQALVPNMD  180
KQTSTADMLD LAVDHIRGLQ NELQALKKDK EKCSCRGNRP AGR
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G437481
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G437481_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002448088.21e-132transcription factor bHLH129 isoform X2
TrEMBLA0A1D6J8Y81e-155A0A1D6J8Y8_MAIZE; U-box domain-containing protein 7
STRINGGRMZM2G437481_P011e-167(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP141882026
Representative plantOGRP5111580
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.13e-42bHLH family protein