PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G444748_P01
Common NameZm.75219
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 170aa    MW: 17672.9 Da    PI: 7.3905
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G444748_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.21.4e-113678446
                       XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46
                        +r++r+ +NRe+ArrsR RK+  ++eL+  ++ L  eN   +
  GRMZM2G444748_P01 36 QRRAKRMLSNRESARRSRMRKQRHLDELTAQAAHLRRENAHVA 78
                       689************************************8665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.4E-143397IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.7263577IPR004827Basic-leucine zipper domain
PfamPF001706.6E-103678IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.1E-937107No hitNo description
SuperFamilySSF579593.09E-103784No hitNo description
CDDcd147021.18E-153886No hitNo description
PROSITE patternPS0003604055IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009845Biological Processseed germination
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
MASSSGSGSS GSLSAATAAL AAAAGTEEEL RALMEQRRAK RMLSNRESAR RSRMRKQRHL  60
DELTAQAAHL RRENAHVATA LGLTAQGLLA VDAENAVLRT QTAELAARLG SLNDILACMN  120
TNAVGAVAVS LTAAAAAAAS SDPCLAFDGA TALDDLLRSC PENMFQYQLC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14956RRSRMRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.752190.0cell lignification| ear| endosperm| meristem| pericarp| tassel
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G444748
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00239DAPTransfer from AT1G75390Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G444748_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0673560.0BT067356.2 Zea mays full-length cDNA clone ZM_BFc0022C11 mRNA, complete cds.
GenBankBT0853010.0BT085301.2 Zea mays full-length cDNA clone ZM_BFb0368K21 mRNA, complete cds.
GenBankBT0853530.0BT085353.2 Zea mays full-length cDNA clone ZM_BFc0002B07 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001344080.11e-115uncharacterized protein LOC111274020
TrEMBLF1DK381e-114F1DK38_MAIZE; BZIP transcription factor (Fragment)
STRINGGRMZM2G444748_P011e-114(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44593367
Representative plantOGRP5511678
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34590.17e-27G-box binding factor 6