PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G461907_P01
Common NameEREB123
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family ERF
Protein Properties Length: 231aa    MW: 25238.1 Da    PI: 8.2506
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G461907_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP241.43.5e-13147190149
                AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaa 49 
                        ++y+GV +++ rgr+v++ +d+     + kr +lg f+taeeAa++++  
  GRMZM2G461907_P01 147 PRYRGVLRRR-RGRYVVRTCDW-----KdKRMWLGMFDTAEEAARRYDSE 190
                        68****8666.8******9999.....56******************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103211.403133IPR001471AP2/ERF domain
SMARTSM003800.0074139IPR001471AP2/ERF domain
SuperFamilySSF541711.83E-7134IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.2E-10134IPR001471AP2/ERF domain
PfamPF008475.0E-8147188IPR001471AP2/ERF domain
SuperFamilySSF541711.63E-13148205IPR016177DNA-binding domain
SMARTSM003808.7E-14148210IPR001471AP2/ERF domain
PROSITE profilePS5103216.147148204IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.3E-17148205IPR001471AP2/ERF domain
PRINTSPR003676.0E-6149160IPR001471AP2/ERF domain
PRINTSPR003676.0E-6170186IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0006339anatomyjuvenile vascular leaf
PO:0006340anatomyadult vascular leaf
PO:0008018anatomytransition vascular leaf
PO:0009025anatomyvascular leaf
PO:0020142anatomystem internode
PO:0025142anatomyleaf tip
PO:0001052developmental stagevascular leaf expansion stage
PO:0001053developmental stagevascular leaf post-expansion stage
PO:0001083developmental stageinflorescence development stage
PO:0007063developmental stageLP.07 seven leaves visible stage
PO:0007101developmental stageLP.09 nine leaves visible stage
PO:0007106developmental stageLP.03 three leaves visible stage
PO:0007116developmental stageLP.11 eleven leaves visible stage
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MWLGTFDSAE EAVRRYDSET RRLRGPSAIT NFPVTSDDRV PLPTSSLHAV DEHSFAADES  60
QPVVGSPVST TPPPKPVDAA AETLSTFFSS DKADAGGGAE AAAGPRKFVM EIHMEEHRPR  120
CNATAPTGRV AGGGKRKVAV AGTPAEPRYR GVLRRRRGRY VVRTCDWKDK RMWLGMFDTA  180
EEAARRYDSE TRRLRVPSAI TNFPATSDDR VSLPAPSLHA VDEHSFAANE S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1134156KRKVAVAGTPAEPRYRGVLRRRR
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G461907
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G461907_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7277130.0KJ727713.1 Zea mays clone pUT5652 AP2-EREBP transcription factor (EREB123) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020396639.15e-95AP2/ERF and B3 domain-containing protein Os05g0549800
TrEMBLA0A060D7941e-166A0A060D794_MAIZE; AP2-EREBP transcription factor (Fragment)
STRINGGRMZM2G461907_P011e-167(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP131332332
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.16e-11ethylene responsive element binding factor 3