PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G468056_P01
Common NameZEAMMB73_263117
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family WRKY
Protein Properties Length: 241aa    MW: 25126.9 Da    PI: 5.8204
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G468056_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY32.91.3e-10991382259
                        EEEEEE-ST..T---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY  22 rsYYrCtsa..gCpvkkkversaedpkvveitYegeHnhe 59 
                        r YYrC+++  gC ++++v+r++e+p + ei Y g+H+++
  GRMZM2G468056_P01  99 RLYYRCAHKdqGCDATRRVQRTREQPAAYEIAYYGDHTCR 138
                        89******9999*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007748.3E-796139IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.9E-1198138IPR003657WRKY domain
SuperFamilySSF1182903.4E-1098138IPR003657WRKY domain
PfamPF031062.4E-1198138IPR003657WRKY domain
PROSITE profilePS5081110.09799135IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    Send to blast
MTLDTPAAVV LELMTMGQQS AAHLGDLLRA ASPAAASPHQ ELAAEILRCC GRVIDALRAA  60
AAASGHKRKA AAEYQDAAAG GGASPPPPPP PPGPPLKRRL YYRCAHKDQG CDATRRVQRT  120
REQPAAYEIA YYGDHTCRGA ATAWQQGAPA PAVVDFGSNS WGSADTTSGG SPASVPLGGW  180
WSPSASSEVG FEAHAAAHEW RDTAAAAPDP VMEFLDGAFG WESVLEDRFD LGGLHGIATF  240
Q
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.1284010.0ovary
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G468056
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G468056_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9720070.0EU972007.1 Zea mays clone 373365 hypothetical protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008657117.11e-166WRKY transcription factor WRKY71
TrEMBLA0A1D6G9501e-136A0A1D6G950_MAIZE; Putative WRKY DNA-binding domain superfamily protein
STRINGGRMZM2G468056_P011e-173(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP83223147
Representative plantOGRP1292445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80590.14e-11WRKY DNA-binding protein 66