PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G472589_P01
Common NameZEAMMB73_510523
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family Nin-like
Protein Properties Length: 855aa    MW: 95987.2 Da    PI: 9.8375
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G472589_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK21.16.2e-07162187328
             RWP-RK   3 keisledlskyFslpikdAAkeLgvc 28 
                        ++i+l d+++yF+lpi+dA+k+L+++
  GRMZM2G472589_P01 162 DSITLVDIAQYFHLPIRDASKTLKIG 187
                        689*********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 855 aa     Download sequence    Send to blast
MVDEDIVTLH NKEFCDWFQK RCENKKNVTP PIHNFQVHIA LGFQLILGSP RSSPRPAFGN  60
PRPTPGSRVL PSSSRVVVLR RRPAPASPPS SRAGVLPSSR AGVPRSSRAG VLPSSRADVP  120
PLRPSHHPAP RASLPSSRAH ASTAELAPPV QKHTRANRKH IDSITLVDIA QYFHLPIRDA  180
SKTLKIGDQM SSESSSDTSG SSTSKTSGST STSSSTSLHL EDIVEKVKKD KTPFEDYLEL  240
KKEWWPDFVE WVTSDEYIAL GEKGKQSQSM NKFRQKLGRR SYTVQKRKWA KEDAQALTEG  300
KSIPFQDMPD GRHKDWARAR NPSGDVNITE SHPIIKKIVD LNEKSVAGTF TPLDNMDILA  360
TAIGSNHPGR TTGVSAYVGL GMGLAQGDGP RKKKRRTTKE YVKRIVDEYE AKFEKLIALC  420
QSMERRLNNS ESCSSSKFVD TPNHATHHSV DSLQEVMKCK LVVQIGLQSV LVARGQAYPP  480
KDVVTVHGIE RRDDHTKVQV DFVFDNFLEF PLPIPIAGGD MFTLGEAKNS FVLWPKSGIQ  540
LAEETTVHAK PQQVPDTSPQ VLHHTPEKDK MPTPTMGTEN IDVTHSASNV SKKRKHKHKK  600
HSKSKEKEQK TSQQKNIEDD GLDPLWTPPF HQRSPPPVPN NKQFVLGQPL VSSALLKRMG  660
KQSQCFHKWY FAMTTPISRR QSATHFMVRY EEHDFLEKSG VYAVEFSDVF HIYNDLALDI  720
SLHRSWMLCM RKIDKYRGIV GFLDPEMIIL KRINEEADEV EAYIVKALLA QQDKECIFVV  780
CQEGAFGAYV DKKGRHNKNF GRTVIWKHFQ GRAGFATCPL LPDEIANVRE RLLNFFMNEV  840
IDIGGSCRVE GASYN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1391395KKKRR
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.241651e-137cell culture| shoot
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G472589
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G472589_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0373487e-65BT037348.1 Zea mays full-length cDNA clone ZM_BFb0165E20 mRNA, complete cds.
GenBankEU9692637e-65EU969263.1 Zea mays clone 327733 RWP-RK domain containing protein mRNA, complete cds.
GenBankHQ8587697e-65HQ858769.1 Zea mays clone UT1753 NLP transcription factor mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020393519.10.0uncharacterized protein LOC103625969
TrEMBLA0A3L6E9A80.0A0A3L6E9A8_MAIZE; Serine/threonine-protein kinase RUNKEL
STRINGGRMZM2G472589_P010.0(Zea mays)