PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G501775_P01
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family WRKY
Protein Properties Length: 423aa    MW: 45973.1 Da    PI: 7.0429
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G501775_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY24.17.4e-082683171759
                        T-SS-EEEEEE-ST...T---EEEEEE-SSST....TEEEEEEES--SS- CS
               WRKY  17 gsefprsYYrCtsa...gCpvkkkversaedp....kvveitYegeHnhe 59 
                        + ++  +YYrC+ +   gCp++k v+++++d+    k++++ Y g+H+++
  GRMZM2G501775_P01 268 EIDTNWNYYRCANSkdqGCPATKTVQQKETDGsgavKLFDVDYYGQHTCN 317
                        5566679****9988889************9833335899********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007743.8E-7268318IPR003657WRKY domain
PfamPF031061.5E-9270316IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.8E-8270317IPR003657WRKY domain
SuperFamilySSF1182903.79E-7272318IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    Send to blast
MVDLHDLILP ILDPCSRQAK HVQQLFQDIS SSSSKVISFV LELADDNSKK QQASKVVKDR  60
RKAGGKNVVE SHMLLEEAKE IGKNRRSVAV SSTSHHGSKM SNAVASLLAL AVVRATCRGR  120
PPSSLLLDFP PLAPCAYHSP PAVSGRRSVV VSSMCYHGSK MSKAPSSQTK ADPRAPALAL  180
SSTTNLANLL PTGVLLAFNL LALKSPFDGC VYYVVTSCTG LRLLNYLPDA SPLPEGVTRR  240
SPPQGTGTRH RIPIVANTVA KYKKSNREID TNWNYYRCAN SKDQGCPATK TVQQKETDGS  300
GAVKLFDVDY YGQHTCNKDG VIHPYVVDTA HDSVPTVDHN QSCSTPTSSA HNNGVHGILQ  360
DDESFENLFM VPSIPEHLTD ESFENLVMVS SIPEYYLADF TDVEMAEGAL EVASMMISED  420
IWA
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G501775
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G501775_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008675625.11e-107probable WRKY transcription factor 63
STRINGGRMZM2G501775_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP133251529
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.18e-07WRKY DNA-binding protein 46