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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
GSBRNA2T00134569001 |
| Common Name | GSBRNA2T00134569001 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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| Family |
NAC |
| Protein Properties |
Length: 242aa MW: 27682.5 Da PI: 8.9521 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GSBRNA2T00134569001 | genome | Genoscope | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 128.9 | 4e-40 | 2 | 111 | 16 | 128 |
NAM 16 veyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkkt 105
+yL +k++++++++ vi+e+d+yk++Pw+Lp++ ++kewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ + ++ g+kk
GSBRNA2T00134569001 2 RFYLIRKCASEQISA-PVIAEIDLYKFNPWELPEMSLYGDKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGK--PKTLGIKKA 88
58***********99.89***************6666689*************************************98..778****** PP
NAM 106 LvfykgrapkgektdWvmheyrl 128
Lvfy g+apkg kt+W+mheyrl
GSBRNA2T00134569001 89 LVFYAGKAPKGIKTNWIMHEYRL 111
*********************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 242 aa
Download sequence Send
to blast |
MRFYLIRKCA SEQISAPVIA EIDLYKFNPW ELPEMSLYGD KEWYFFSPRD RKYPNGSRPN 60
RAAGTGYWKA TGADKPIGKP KTLGIKKALV FYAGKAPKGI KTNWIMHEYR LANVDRSASV 120
SKKNNLRLDD WVLCRIYNKK GTMEKYYPAD EKPRIMTDHS GGHSHVVSPD AKEVQSEPKW 180
RELEDALEAF DSSMFGGGSM DMLQSDAYIP QFMHQPTDCF TTLQDPFEQK PFLNWSFAPQ 240
G*
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| Expression -- UniGene
? help Back to Top |
| UniGene ID |
E-value |
Expressed in |
| Bna.2300 | 0.0 | leaf| microspore-derived embryo| seed| vegetative meristem |
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in roots, cotyledons, rosette leaves, cauline leaves and mature flowers. Expressed at low levels in stems and flower buds. {ECO:0000269|PubMed:16115070}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Involved in disease resistance response (PubMed:16115070, PubMed:19625399). May function as repressor of pathogenesis-related proteins (PubMed:16115070). May function in the regulation of host basal defense responses against viral infection (PubMed:19625399). Transcriptional activator involved in responses to wounding and infection with tobamovirus (TMV) (PubMed:22937923). Binds to the DNA sequences 5'-AAAATATCT-3' and 5'AGATTTTT-3' of CYP734A1/BAS1 and CYP72C1/SOB7 promoters, respectively. Acts as suppressor of the brassinosteroid (BR)-inactivating enzymes CYP734A1/BAS1 and CYP72C1/SOB7, and prevents their expression in almost all tissues. Plays a central role in integrating BR homeostasis and seedling development. Regulates the spatial regulation of BR homeostasis and participates in the regulation of hypocotyl elongation and root growth by suppressing BR catabolism. Mediates connection between BR catabolism and photomorphogenesis (PubMed:26493403). Binds to, and transactivates the promoter of the auxin biosynthetic gene NIT2 (PubMed:22965747). Stress-responsive NAC transcription factor involved in ABA-inducible leaf senescence signaling (PubMed:26518251). Required for normal seed development and morphology (PubMed:18849494). {ECO:0000269|PubMed:16115070, ECO:0000269|PubMed:18849494, ECO:0000269|PubMed:19625399, ECO:0000269|PubMed:22937923, ECO:0000269|PubMed:22965747, ECO:0000269|PubMed:26493403, ECO:0000269|PubMed:26518251}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by wounding, salicylic acid (SA), methyl jasmonate, drought stress, dark and sucrose starvation (PubMed:16115070). Induced by chitin elicitor (chitooctaose) (PubMed:17722694). Induced by salicylic acid and infection with tobamovirus (TMV) (PubMed:19625399). By indole-3-acetonitrile, salicylic acid (SA), sodium nitroprusside (SNP), salt stress and drought stress (PubMed:22965747). Down-regulated by brassinosteroid (BR) and transition from dark to white light (PubMed:26493403). {ECO:0000269|PubMed:16115070, ECO:0000269|PubMed:17722694, ECO:0000269|PubMed:19625399, ECO:0000269|PubMed:22965747, ECO:0000269|PubMed:26493403}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AY245882 | 0.0 | AY245882.1 Brassica napus NAC-domain protein 5-7 (NAC5-7) mRNA, complete cds. |
