PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GSMUA_Achr10P00420_001

Organism

Musa acuminata

Taxonomic ID

4641

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa

Family

bZIP

Protein Properties

Length: 234aa MW: 25745.9 Da PI: 10.2711

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GSMUA_Achr10P00420_001	genome	CIRAD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	45.6	1.6e-14	163	210	5	52
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 +r++r++kNRe+A rsR+R++a++ eLe+kv Le+eN++L k el GSMUA_Achr10P00420_001 163 RRQKRMIKNRESAARSRARRQAYTNELENKVVLLEEENQRLVKHKAEL 210 79**************************************98876666 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PRINTS	PR00041	2.3E-5	158	174	IPR001630	cAMP response element binding (CREB) protein
SMART	SM00338	1.9E-9	159	212	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.231	161	211	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	6.88E-11	163	211	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.8E-13	163	211	No hit	No description
Pfam	PF00170	1.3E-12	163	211	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	166	181	IPR004827	Basic-leucine zipper domain
PRINTS	PR00041	2.3E-5	176	196	IPR001630	cAMP response element binding (CREB) protein
PRINTS	PR00041	2.3E-5	196	213	IPR001630	cAMP response element binding (CREB) protein

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence Send to blast
MADHGGGRDQ QLQPLTDAEH GSFHGLMLNE VQSRLGGPLH GLSLGDLLEH APLVADGLRC 60 SWSGGVPRVL SKKTIVEAWR DIQLRHEEGS SERAVLGEMT VEDFLPKAGA AAQGTDSGVA 120 DAHAVRSPGR GSNSSAAAAT APPRSRRRRR VATEDVAEKM VERRQKRMIK NRESAARSRA 180 RRQAYTNELE NKVVLLEEEN QRLVKHKAEL EAVERSMPHP DPKHQLRRTS SAPF

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_018674994.1	1e-145	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	4e-42	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	M0RE69	1e-168	M0RE69_MUSAM; Uncharacterized protein
STRING	GSMUA_Achr10P00420_001	1e-169	(Musa acuminata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4441	33	67

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41070.3	3e-21	bZIP family protein

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]