PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr10P09150_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family ERF
Protein Properties Length: 222aa    MW: 23646.4 Da    PI: 8.245
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr10P09150_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.1e-191964251
                     AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51
                            +++GVr ++ +gr++AeIrdp   +k+ r++lg+fgtaeeAa+a++aa++
  GSMUA_Achr10P09150_001 19 HFRGVRKRP-WGRYAAEIRDP---NKKSRIWLGTFGTAEEAARAYDAAAR 64
                            69*******.**********9...347*********************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.58E-151851No hitNo description
PROSITE profilePS5103219.7961977IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-251969IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-171965IPR016177DNA-binding domain
PfamPF008471.7E-131963IPR001471AP2/ERF domain
SMARTSM003803.5E-251983IPR001471AP2/ERF domain
PRINTSPR003671.7E-102031IPR001471AP2/ERF domain
PRINTSPR003671.7E-104258IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MAPRGKATTV GDGEGKEAHF RGVRKRPWGR YAAEIRDPNK KSRIWLGTFG TAEEAARAYD  60
AAARDSSSQS STVENSGSSE AAAAAAMPSL PAPLPPSPDI NLVYRGQGGA RFPFQPYSPV  120
IQAAQPFFFL NTVARSENFP TSDASMTAYH RQLPLCQPTI IACWHPPPAV TVAAVTATQS  180
DSDSSSVVDR HPDHRSPPSP SASPKSFALH LDLNLPPPLD TA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-161173569Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009420618.14e-96PREDICTED: ethylene-responsive transcription factor 4-like
TrEMBLM0RGP11e-160M0RGP1_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr10P09150_0011e-161(Musa acuminata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.12e-18erf domain protein 9