PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr10P16900_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family ERF
Protein Properties Length: 344aa    MW: 37769.8 Da    PI: 8.3938
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr10P16900_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.96.9e-15136176347
                     AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaai 47 
                             ++GVr++   g+WvAeIr p++   r+r++lg+f+tae+Aa a++
  GSMUA_Achr10P16900_001 136 FRGVRQRQ-LGKWVAEIRLPRN---RTRVWLGTFDTAEDAAMAYE 176
                             8****999.8*********955...5*****************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.87E-22134189No hitNo description
SuperFamilySSF541711.9E-15135188IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.0E-22135188IPR001471AP2/ERF domain
SMARTSM003809.8E-23135193IPR001471AP2/ERF domain
PROSITE profilePS5103216.529135177IPR001471AP2/ERF domain
PfamPF008477.3E-9136176IPR001471AP2/ERF domain
PRINTSPR003674.9E-9136147IPR001471AP2/ERF domain
PRINTSPR003674.9E-9158174IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MEDQFRLVTS NGAVDPAMVM ATQAKRYGDN DGRSSSPTVL NFLEVKAERP TESFELNGSV  60
STYLLFPSPP CSSLCSSLVR SYVPASDVPP AGKRDFHLQT HQKLKQRSAP QWLQIHSTNS  120
TSSLQQRLGH GPVKLFRGVR QRQLGKWVAE IRLPRNRTRV WLGTFDTAED AAMAYELGGD  180
AVHLNFPHAK QQLHVAARGP GHPHAAIASL LEAKLQASGG SACSTSPSWS LNELKRAWEK  240
DLLRVGVDEC GPPEMKRHKT ASADSSPAFI ECSGQGAALG CRWGDDKQDA FLGHGHDMGF  300
SPQTLISEFL DSLRLSLPLS FFLLITSPER PLLRPPDFVP PIRE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018675309.10.0PREDICTED: ethylene-responsive transcription factor RAP2-13-like isoform X1
RefseqXP_018675310.10.0PREDICTED: ethylene-responsive transcription factor RAP2-13-like isoform X1
RefseqXP_018675311.10.0PREDICTED: ethylene-responsive transcription factor RAP2-13-like isoform X1
RefseqXP_018675312.10.0PREDICTED: ethylene-responsive transcription factor RAP2-13-like isoform X1
RefseqXP_018675313.10.0PREDICTED: ethylene-responsive transcription factor RAP2-13-like isoform X1
RefseqXP_018675314.10.0PREDICTED: ethylene-responsive transcription factor RAP2-13-like isoform X1
RefseqXP_018675315.10.0PREDICTED: ethylene-responsive transcription factor RAP2-13-like isoform X1
TrEMBLM0RIW50.0M0RIW5_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr10P16900_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38235203
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.15e-28ERF family protein