PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr10P30460_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family EIL
Protein Properties Length: 337aa    MW: 38244.7 Da    PI: 9.4303
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr10P30460_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3342.96.9e-10512637281
                             XXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                    EIN3   7 mwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLra 93 
                             mwkd+ ll +lk+r+ q+ +  + a     +   +e++rr++m+raQDg+L+ Mlk+m+ c a+GfvYgi+pe g pv+g+s++L++
  GSMUA_Achr10P30460_001   1 MWKDKLLLTKLKQRRGQQQGGFSGA---LVEPLAKERSRRRAMARAQDGVLRCMLKMMQHCSARGFVYGIVPERGDPVTGSSENLKS 84 
                             9**************9977666654...4445799**************************************************** PP

                             XXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S- CS
                    EIN3  94 WWkekvefdrngpaaisky...qaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGk 177
                             WWk+ v+fdrn+paai+++   q+++l+l          +s+  +l  lqD+tlgSLLsal+qhc+ppqrrfple+g++pPWWPtG+
  GSMUA_Achr10P30460_001  85 WWKDSVAFDRNAPAAIAQStlaQPNELVL----------TSYIDRLRMLQDSTLGSLLSALIQHCEPPQRRFPLERGLPPPWWPTGE 161
                             *****************994444444444..........58999******************************************* PP

                             -HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXX CS
                    EIN3 178 elwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahs 264
                             e wwg +g ++ qg+ppy+kphdlkkawk+s+Ltavikhmsp++ ++r+l++qsk+lq+km+akes ++++ +nqee++++    + 
  GSMUA_Achr10P30460_001 162 EPWWGVQGEAHAQGPPPYRKPHDLKKAWKLSLLTAVIKHMSPNLGHMRNLVWQSKRLQNKMTAKESEVWSKMVNQEEALLQLANRSL 248
                             *****************************************************************************9885443332 PP

                             X.XXXXXXXXXXXXXXXX CS
                    EIN3 265 s.slrkqspkvtlsceqk 281
                             + s     p+  +  ++ 
  GSMUA_Achr10P30460_001 249 RiS---PIPEDEAAGNSA 263
                             221...333333333333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048736.3E-1051238No hitNo description
Gene3DG3DSA:1.10.3180.104.7E-63115242IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.12E-56119241IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MWKDKLLLTK LKQRRGQQQG GFSGALVEPL AKERSRRRAM ARAQDGVLRC MLKMMQHCSA  60
RGFVYGIVPE RGDPVTGSSE NLKSWWKDSV AFDRNAPAAI AQSTLAQPNE LVLTSYIDRL  120
RMLQDSTLGS LLSALIQHCE PPQRRFPLER GLPPPWWPTG EEPWWGVQGE AHAQGPPPYR  180
KPHDLKKAWK LSLLTAVIKH MSPNLGHMRN LVWQSKRLQN KMTAKESEVW SKMVNQEEAL  240
LQLANRSLRI SPIPEDEAAG NSAAEKGPDG RRNDDKRKCE FGDNSREKCS RAELQNVDGS  300
GEFELDLSGN CVLEDDRRAI DELMMLYYSA RDFTRLV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A1e-531202406126Protein ETHYLENE INSENSITIVE 3
4zds_B1e-531202406126Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009381901.20.0PREDICTED: putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ9LX164e-96EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLM0RMS00.0M0RMS0_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr10P30460_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-81EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]