PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GSMUA_Achr11P01320_001

Organism

Musa acuminata

Taxonomic ID

4641

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa

Family

NAC

Protein Properties

Length: 262aa MW: 30153.3 Da PI: 9.4128

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GSMUA_Achr11P01320_001	genome	CIRAD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	153.6	8.7e-48	11	137	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 pGfrF Pt+eel+++yL++ v g+kl++ +vi +++iy+++Pw+Lp +k +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d GSMUA_Achr11P01320_001 11 PGFRFYPTEEELLDFYLRRVVLGQKLHF-DVIGSLNIYRHDPWELPGLAKIGEREWYFFVPRDRKSGSGGRPNRTTERGFWKATGSD 96 9***********************99.99***********8888899****************************** PP NAM 90 kevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ ++ g+++g+kktLvfy+grap+g+ktdW+m+eyrl GSMUA_Achr11P01320_001 97 RQIRKAaePGRVIGVKKTLVFYRGRAPRGTKTDWIMNEYRL 137 998777889**************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	55.714	9	161	IPR003441	NAC domain
SuperFamily	SSF101941	1.7E-57	10	161	IPR003441	NAC domain
Pfam	PF02365	5.2E-25	11	137	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009965	Biological Process	leaf morphogenesis
GO:0010200	Biological Process	response to chitin
GO:0045792	Biological Process	negative regulation of cell size
GO:0048281	Biological Process	inflorescence morphogenesis
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence Send to blast
MERRGSQLDL PGFRFYPTEE ELLDFYLRRV VLGQKLHFDV IGSLNIYRHD PWELPGLAKI 60 GEREWYFFVP RDRKSGSGGR PNRTTERGFW KATGSDRQIR KAAEPGRVIG VKKTLVFYRG 120 RAPRGTKTDW IMNEYRLPEA NSASSAMPLK EDVVLCKVYR KATSLKELEQ RAAKEEDAKA 180 SQGYISMAAD SASNSDQENY QSRSAPMDCG VKEMKQEVIR PVNLPELQVP MSGTEWMQDP 240 FLAQLRSPWL DQWSPYANIL HF

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	4e-51	6	167	13	171	NO APICAL MERISTEM PROTEIN
1ut4_B	4e-51	6	167	13	171	NO APICAL MERISTEM PROTEIN
1ut7_A	4e-51	6	167	13	171	NO APICAL MERISTEM PROTEIN
1ut7_B	4e-51	6	167	13	171	NO APICAL MERISTEM PROTEIN
3swm_A	4e-51	6	167	16	174	NAC domain-containing protein 19
3swm_B	4e-51	6	167	16	174	NAC domain-containing protein 19
3swm_C	4e-51	6	167	16	174	NAC domain-containing protein 19
3swm_D	4e-51	6	167	16	174	NAC domain-containing protein 19
3swp_A	4e-51	6	167	16	174	NAC domain-containing protein 19
3swp_B	4e-51	6	167	16	174	NAC domain-containing protein 19
3swp_C	4e-51	6	167	16	174	NAC domain-containing protein 19
3swp_D	4e-51	6	167	16	174	NAC domain-containing protein 19
4dul_A	4e-51	6	167	13	171	NAC domain-containing protein 19
4dul_B	4e-51	6	167	13	171	NAC domain-containing protein 19
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269\|PubMed:26834774}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269\|PubMed:26834774}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009382062.1	0.0	PREDICTED: NAC domain-containing protein 35
Swissprot	Q10S65	1e-108	NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBL	M0RNG2	0.0	M0RNG2_MUSAM; Uncharacterized protein
STRING	GSMUA_Achr11P01320_001	0.0	(Musa acuminata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1770	38	105

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	1e-94	NAC domain containing protein 36

Publications ? help Back to Top
Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774]