PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr11P03050_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 424aa    MW: 46546.5 Da    PI: 6.9106
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr11P03050_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.81.7e-11282340563
                             CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                             kr +r   NR +A rs +RK  +i+eLe kv++L++e ++L  +l +l+  +a l++++
  GSMUA_Achr11P03050_001 282 KRVKRILANRQSAARSKERKTRYIAELEHKVQALQTETTTLSTQLTSLQRDSAGLTNQN 340
                             899***********************************************999999887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.8E-17278342IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.013280343IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.81E-11282338No hitNo description
Gene3DG3DSA:1.20.5.1702.8E-12282339No hitNo description
PfamPF001702.2E-10282340IPR004827Basic-leucine zipper domain
CDDcd147036.51E-16283353No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    Send to blast
MQQLRGNPFL PRLKQQQYSS NAAEAGKFLF PAPRLPPMAH QLPPAGHLHS HSRSQPTVFS  60
LDSLQSPSCN VDSTPTADVS MDEHHVRSSH SPPLPPCNAA SCAADLARTK EGPPPRKAHR  120
RSQSDVPFAF LSPSQPVEID WNRGLDAAGV TGDDLFNAYM NLDGLDALNS SEDNHEDFDS  180
RDSGSKTNAA DSSENEADSN VKEHTGGSSS RHSRSLSMDS FVGKFNFVEE PPKPLPFPGS  240
RAGHAAPNTF SLEFGNGHFS GVEMKKIMEN EKLVEMARTD PKRVKRILAN RQSAARSKER  300
KTRYIAELEH KVQALQTETT TLSTQLTSLQ RDSAGLTNQN TELKFRLQAM ERQAQLRDAL  360
NEALTAEVQH LKLAAAGLTD AHSSNSLNPG ETSVNPHIFL LQQQYPTPET TDRGSHGFQF  420
RSIT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009383055.20.0PREDICTED: transcription factor RF2a-like
TrEMBLM0RNY50.0M0RNY5_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr11P03050_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62473650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.34e-82bZIP family protein