PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr11P07800_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family NAC
Protein Properties Length: 189aa    MW: 21908.2 Da    PI: 10.1708
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr11P07800_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.54.5e-5271411128
                     NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWka 85 
                             lp+GfrFhPtdeelv++yL+ k +g+  + ++vi+e+d++k+ePwdLp k  +++++ ew+fF++rd+ky++g r++rat++gyWka
  GSMUA_Achr11P07800_001   7 LPVGFRFHPTDEELVSHYLRGKNTGRIKPHDDVIPEIDVCKCEPWDLPgKsLIESDDPEWFFFAPRDRKYPNGLRSKRATEAGYWKA 93 
                             79*************************99999****************6446677788***************************** PP

                     NAM  86 tgkdkevlsk.....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                             tgkd+ + sk       + +g+kktLvf++grap+g++t+W+mheyr 
  GSMUA_Achr11P07800_001  94 TGKDRVIRSKataaaAAAPIGMKKTLVFHRGRAPNGVRTNWIMHEYRT 141
                             *********8665555555***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.72E-566148IPR003441NAC domain
PROSITE profilePS5100554.1297162IPR003441NAC domain
PfamPF023654.1E-288140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MIRPGKLPVG FRFHPTDEEL VSHYLRGKNT GRIKPHDDVI PEIDVCKCEP WDLPGKSLIE  60
SDDPEWFFFA PRDRKYPNGL RSKRATEAGY WKATGKDRVI RSKATAAAAA APIGMKKTLV  120
FHRGRAPNGV RTNWIMHEYR TTEPEFEAGD QANWRRFKIH TSWAWKLLLF FSFSFVKSSI  180
TFLIEFTFC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A2e-42714920153NAC domain-containing protein 19
3swm_B2e-42714920153NAC domain-containing protein 19
3swm_C2e-42714920153NAC domain-containing protein 19
3swm_D2e-42714920153NAC domain-containing protein 19
3swp_A2e-42714920153NAC domain-containing protein 19
3swp_B2e-42714920153NAC domain-containing protein 19
3swp_C2e-42714920153NAC domain-containing protein 19
3swp_D2e-42714920153NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP). {ECO:0000250|UniProtKB:Q949N0}.
UniProtTranscriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) (PubMed:18443413, PubMed:24329768). Calmodulin-regulated transcriptional repressor. Binds several synthetic promoters with randomly selected binding sites (PubMed:17947243). Functions synergistically with SNI1 as negative regulator of pathogen-induced PR1 expression and basal resistance to a virulent strain of P.syringae. Binds directly to the promoter of the PR1 gene (PubMed:22826500). Acts as positive regulator of innate immunity. Involved in the effector-triggered immunity (ETI) induction of immunity-related gene expression (PubMed:24329768). Mediates osmotic stress signaling in leaf senescence by up-regulating senescence-associated genes (PubMed:18443413). {ECO:0000269|PubMed:17947243, ECO:0000269|PubMed:18443413, ECO:0000269|PubMed:22826500, ECO:0000269|PubMed:24329768}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By cold, heat and drought stresses. {ECO:0000269|PubMed:17158162}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009382805.11e-101PREDICTED: uncharacterized protein LOC103970661 isoform X3
SwissprotB5X5707e-61NAC14_ARATH; NAC domain-containing protein 14
SwissprotF4JN354e-61NTL9_ARATH; Protein NTM1-like 9
TrEMBLM0RQB01e-138M0RQB0_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr11P07800_0011e-139(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP51723859
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.22e-62NAC 014
Publications ? help Back to Top
  1. Zheng XY, et al.
    Spatial and temporal regulation of biosynthesis of the plant immune signal salicylic acid.
    Proc. Natl. Acad. Sci. U.S.A., 2015. 112(30): p. 9166-73
    [PMID:26139525]
  2. Guo T, et al.
    Lamin-like Proteins Negatively Regulate Plant Immunity through NAC WITH TRANSMEMBRANE MOTIF1-LIKE9 and NONEXPRESSOR OF PR GENES1 in Arabidopsis thaliana.
    Mol Plant, 2017. 10(10): p. 1334-1348
    [PMID:28943325]