PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GSMUA_Achr11P15610_001

Organism

Musa acuminata

Taxonomic ID

4641

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa

Family

bZIP

Protein Properties

Length: 243aa MW: 27093.5 Da PI: 9.6552

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GSMUA_Achr11P15610_001	genome	CIRAD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50.7	3.8e-16	173	216	5	48
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r +r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lkk+ GSMUA_Achr11P15610_001 173 RRHKRMIKNRESAARSRARKQAYTNELENKVSHLEKENERLKKQ 216 799**************************************965 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	5.8E-12	169	241	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.553	171	216	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	9.38E-12	173	218	No hit	No description
Gene3D	G3DSA:1.20.5.170	5.8E-15	173	218	No hit	No description
Pfam	PF00170	1.3E-13	173	216	IPR004827	Basic-leucine zipper domain
CDD	cd14707	2.02E-24	173	221	No hit	No description
PROSITE pattern	PS00036	0	176	191	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence Send to blast
MGVMTMASQG GVGNSGDGQR SQTQGLSRQG SFYNMTLNEV QNHLGEPLHS MNLDDLLKTV 60 FAAEGNQLSK LSKKTVDQVW RDIQLGNEKG DEVQGSGHGR QPTLGEMTLE DFLVKAGRMA 120 TIDQQIHGQQ SMTGAYMPNC INISSPTLGA FSDSQTPSRK HGASEDLDIL AERRHKRMIK 180 NRESAARSRA RKQAYTNELE NKVSHLEKEN ERLKKQKELD KILLSVPLPE PRYQLRRTSS 240 SPF

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009383874.1	1e-160	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	2e-67	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	M0RSJ1	1e-180	M0RSJ1_MUSAM; Uncharacterized protein
STRING	GSMUA_Achr11P15610_001	0.0	(Musa acuminata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4441	33	67

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	9e-70	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]