PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr11P25310_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 182aa    MW: 20508 Da    PI: 11.0348
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr11P25310_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.32.2e-1058117463
                             XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                              +r++rk +NRe+ArrsR RK++++e L+  v ++ +e +++   +   +++   l+se+
  GSMUA_Achr11P25310_001  58 ERRQKRKLSNRESARRSRMRKQQRLEYLTSTVVQMRNEKTRMVALVAGVTQQRRLLESEN 117
                             68*************************************999888777777777776665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.4E-854113No hitNo description
SMARTSM003383.6E-1355119IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.01357120IPR004827Basic-leucine zipper domain
PfamPF001703.5E-757116IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.78E-859109No hitNo description
CDDcd147021.92E-1460111No hitNo description
PROSITE patternPS0003606277IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MIRFLSRIPV RCPNGVWSVS IRAHSLSPIS TPLLLFVFYV VFLVACSLMM TQNPAAAERR  60
QKRKLSNRES ARRSRMRKQQ RLEYLTSTVV QMRNEKTRMV ALVAGVTQQR RLLESENSVL  120
RAQAVEFAER LQSLSSVLRL VDDVRGAAME DVSEIPPPVP GLWQSPLPGV PILASADVFE  180
CC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17178RRSRMRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018676069.17e-88PREDICTED: bZIP transcription factor 53-like isoform X1
TrEMBLM0RVB11e-128M0RVB1_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr11P25310_0011e-128(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP188635100
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62420.14e-27basic region/leucine zipper motif 53