PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr11P26170_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 309aa    MW: 34133.4 Da    PI: 9.7649
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr11P26170_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.48.4e-10232272444
                             XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 
                              k  rr+++NReAA++sR++Kka++++Le    +L++  ++
  GSMUA_Achr11P26170_001 232 AKTLRRLAQNREAAKKSRLKKKAYVQQLESSRIKLQQLEQD 272
                             6889*************************876666655555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-5229291IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.979231275IPR004827Basic-leucine zipper domain
PfamPF001703.0E-7232273IPR004827Basic-leucine zipper domain
CDDcd147081.37E-21233284No hitNo description
SuperFamilySSF579591.69E-6233276No hitNo description
Gene3DG3DSA:1.20.5.1701.2E-7234277No hitNo description
PROSITE patternPS000360236251IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MANHRVGETG LPDSGPSTRS LINGTIGNTP SATNFFDQEG AAYFGELEEA LMQGVDGLRE  60
TEDRKSFIAT SPATLEIFPS WPMRFQQTPS VNTQSARSTD SGAAQNSLSH LESDFPNSRK  120
ASSDQSTNHK RPQEMMMASG ASRTEAARNP HPSSQEEVLF DCFVIHHLEK VWILVFASTL  180
NMPLSFVYSW AFELATMVNV RADISKQPFL RCMFQRKMTG STAARDGKVI DAKTLRRLAQ  240
NREAAKKSRL KKKAYVQQLE SSRIKLQQLE QDLQRARSQG LLLGVAGGNA AISSGNEPHF  300
HPSISTRLS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018676179.11e-117PREDICTED: transcription factor LG2-like isoform X3
TrEMBLM0RVJ70.0M0RVJ7_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr11P26170_0010.0(Musa acuminata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.25e-23bZIP family protein