PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr1P05090_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family ERF
Protein Properties Length: 136aa    MW: 14780.8 Da    PI: 10.0545
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr1P05090_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2254.7e-082283056
                    AP2 30 rfslgkfgtaeeAakaaiaarkklege 56
                           r++lg++ ++e Aa a+++a+ kl+ge
  GSMUA_Achr1P05090_001  2 RIWLGTYASPESAAYAYDRAAYKLRGE 28
                           79***********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103213.208135IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.4E-14236IPR001471AP2/ERF domain
SuperFamilySSF541715.49E-11236IPR016177DNA-binding domain
PfamPF008478.9E-5228IPR001471AP2/ERF domain
SMARTSM003803.5E-4241IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    Send to blast
MRIWLGTYAS PESAAYAYDR AAYKLRGEYA RLNFPALRDA GDCPERLRSL RSAVDSKIQA  60
ICQRLGRRRA AKRSAKAAGD KARSAKAAAK AVKDAEAGAS QTSSLTSSSA FEMDGVCSLA  120
RMPSYDPELI WEVLTN
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018680305.14e-92PREDICTED: ethylene-responsive transcription factor ERF061-like, partial
SwissprotQ9C7W22e-20ERF61_ARATH; Ethylene-responsive transcription factor ERF061
TrEMBLM0RX679e-92M0RX67_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr1P05090_0011e-92(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP88282842
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22190.16e-19ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]