PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr1P08090_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 466aa    MW: 50922.6 Da    PI: 9.1735
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr1P08090_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1346.2e-11308366563
                            CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                            k+ +r   NR++A rs +RK  +i eLe kv+ L++e ++L  +l  l+  +a l s++
  GSMUA_Achr1P08090_001 308 KKVKRILANRLSAARSKERKMRYITELEHKVQILQTEATTLSAQLTLLQRDSAGLASQN 366
                            8889999******************************************9999998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.9E-17304368IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.496306369IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.52E-11308362No hitNo description
Gene3DG3DSA:1.20.5.1708.7E-11308365No hitNo description
PfamPF001701.5E-9308366IPR004827Basic-leucine zipper domain
CDDcd147033.25E-21309360No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 466 aa     Download sequence    Send to blast
MEDRRSGMMQ RLQSSSSSSA AAAAAPTLPS SSCSSFSSRL PSPLDLPNFA LPFRHFSASF  60
SPDASTAAKR PGIPPIPPSP SSSPAAAVAS PFHSRSLSQP LAFDSLPHLT PPPLPLLIDP  120
MMVDDRPPVA RTPGPRDGLP PRRAHRRSNS DIPFGLPLPS PPAAQPPLHQ RPAPSPKQAE  180
ASCVEDDLII TYMDSFDTLN SGTEEKQEDR KEGNKRSAVG DLTAMNPRHR RSLSMDSSFM  240
GKLHFGDESP KFPASPGNQM GQLSRSGSMD ETMNTFSLEF GNGEFSSAEM KKIMADEKLA  300
EMALADPKKV KRILANRLSA ARSKERKMRY ITELEHKVQI LQTEATTLSA QLTLLQRDSA  360
GLASQNNELK FRLQAMEQQA QLKDALNEAL SAEVQRLKLA TGEISEAQLS KSINQQMQLN  420
PRMSQLHQLQ PHQQQQKQQT AETSLQLPAP QQQQNDVSAK LESSKC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009393224.10.0PREDICTED: transcription factor RF2a
TrEMBLM0RY170.0M0RY17_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr1P08090_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62473650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.36e-74bZIP family protein