PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr1P15350_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family ERF
Protein Properties Length: 119aa    MW: 12976.5 Da    PI: 8.4638
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr1P15350_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2667.4e-211970155
                    AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                           ++y+GVr+++ +g+++AeIrd  +   + +r++lg+f+taeeAa+a+++a+ +++g
  GSMUA_Achr1P15350_001 19 TRYRGVRRRP-WGKYAAEIRDSAQ---HgARVWLGTFDTAEEAARAYDRAAFAMRG 70
                           68********.**********433...35*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.0E-151970IPR001471AP2/ERF domain
CDDcd000181.85E-281978No hitNo description
SuperFamilySSF541715.82E-242078IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.0E-312078IPR001471AP2/ERF domain
SMARTSM003806.6E-372084IPR001471AP2/ERF domain
PROSITE profilePS5103224.0922078IPR001471AP2/ERF domain
PRINTSPR003673.1E-122132IPR001471AP2/ERF domain
PRINTSPR003673.1E-124460IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009789Biological Processpositive regulation of abscisic acid-activated signaling pathway
GO:0010186Biological Processpositive regulation of cellular defense response
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0090332Biological Processstomatal closure
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    Send to blast
MADSTWGGGG GGEKEGEATR YRGVRRRPWG KYAAEIRDSA QHGARVWLGT FDTAEEAARA  60
YDRAAFAMRG SLAVLNFPGE AGAGSSRAGK QVIELECLDD RVLEELLEVT EKEKKSKKK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-3671194131Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00029PBMTransfer from AT5G43410Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009406409.12e-80PREDICTED: ethylene-responsive transcription factor ERF096-like
SwissprotQ9LSX03e-36ERF96_ARATH; Ethylene-responsive transcription factor ERF096
TrEMBLM0S0435e-79M0S043_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr1P15350_0018e-80(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43410.13e-24ERF family protein
Publications ? help Back to Top
  1. Zander M,Thurow C,Gatz C
    TGA Transcription Factors Activate the Salicylic Acid-Suppressible Branch of the Ethylene-Induced Defense Program by Regulating ORA59 Expression.
    Plant Physiol., 2014. 165(4): p. 1671-1683
    [PMID:24989234]